@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-08 )
AITCGQVSSAIAPCLSYARGTGSGPSASCCSGVRNLKSAASTAADRRAACNCLKNAARGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




11 SP3 93.2788%-105 - C2 -1FK5 6.2 NLTP_MAIZE
20 HHSearch 89.8788%-108 - C2 -1AFH - NLTP_MAIZE -
25 HHSearch 84.9159%-111 - C2 -1BWO 6.6 NLTP1_WHEAT
21 HHSearch 83.9460%-112 - C2 -1T12 - NLTP1_TOBAC -
23 HHSearch 81.8055%-113 - C2 -2ALG 3.6 NLTP1_PRUPE
24 HHSearch 74.3549%-113 - C2 -1SIY - NLTP1_VIGRR -
32 HHSearch 56.3322%-137 - C2 -1BEA - ITRF_MAIZE -
13 SP3 53.2219%-117 - C2 -1HSS - IAA1_WHEAT -
34 HHSearch 50.4923%-111 - C2 -1SM7 - ? -
3 Fugue 47.7827%-104 - C2 -1L6H - NLTPX_ORYSJ -
31 HHSearch 46.8818%-103 - C2 -1B1U - IAAT_ELECO -
2 Fugue 46.8422% -73 - C2 -2RKN - DIRL1_ARATH -
36 HHSearch 46.5627% -78 - C2 -1PSY - 2SS_RICCO -
9 Fugue 45.7722%-110 - C2 -1HSS - IAA1_WHEAT -
26 HHSearch 44.6620% -89 - C2 -2RKN - DIRL1_ARATH -
18 SP3 44.1217%-103 - C2 -1QPO - NADC_MYCTU -
4 Fugue 43.3626% -64 - C2 -1PSY - 2SS_RICCO -
12 SP3 42.6821% -76 - C2 -1L6H - NLTPX_ORYSJ -
35 HHSearch 40.9116% -96 - C2 -1S6D - 2SS8_HELAN -
33 HHSearch 38.2220% -61 - C2 -3OB4 - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




43 97.85100%-128 - C- -M043 - -
38 94.39100%-114 - C- -M038 - -
44 93.56100%-118 - C- -M044 - -
40 93.39100%-127 - C- -M040 - -