@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-08 )
AISCGQVASAIAPCISYARGQGSAPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
30 SP3 95.8398%-111 - C3 -1FK5 5.7 NLTP_MAIZE
11 HHSearch 91.2499%-113 - C3 -1AFH - NLTP_MAIZE -
12 HHSearch 86.2560%-117 - C3 -1T12 - NLTP1_TOBAC -
16 HHSearch 84.5057%-114 - C3 -1BWO 6.4 NLTP1_WHEAT
14 HHSearch 81.1760%-114 - C3 -2ALG 3.7 NLTP1_PRUPE
15 HHSearch 78.4051%-119 - C3 -1SIY - NLTP1_VIGRR -
25 HHSearch 54.5925%-112 - C3 -1SM7 - ? -
24 HHSearch 53.9522%-139 - C3 -1BEA - ITRF_MAIZE -
27 HHSearch 53.4027% -92 - C3 -1PSY - 2SS_RICCO -
33 SP3 53.3419%-116 * C3 *1HSS - IAA1_WHEAT -
5 Fugue 52.4523% -46 - C3 -1PSY - 2SS_RICCO -
3 Fugue 48.0433%-103 - C3 -1L6H - NLTPX_ORYSJ -
39 SP3 46.2315% -93 - C3 -1S6D - 2SS8_HELAN -
23 HHSearch 45.4215%-108 - C3 -1S6D - 2SS8_HELAN -
37 SP3 45.0517% -96 - C3 -1QPO - NADC_MYCTU -
22 HHSearch 44.2718% -99 - C3 -1B1U - IAAT_ELECO -
2 Fugue 43.8022% -81 - C3 -2RKN - DIRL1_ARATH -
26 HHSearch 43.3520% -76 - C3 -3OB4 - ? -
17 HHSearch 43.0320% -86 - C3 -2RKN - DIRL1_ARATH -
9 Fugue 42.2015% -63 - C3 -2D5R - TOB1_HUMAN -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
40 94.55100%-113 - C- -M040 - -
44 94.38100%-117 - C- -M044 - -
46 94.04100%-117 - C- -M046 - -