@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-08 )
AISCGQVASAIAPCISYARGQGSGPSASCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
29 SP3 95.0198%-109 - C2 -1FK5 5.7 NLTP_MAIZE
11 HHSearch 90.9199%-114 - C2 -1AFH - NLTP_MAIZE -
16 HHSearch 84.1358%-112 - C2 -1BWO 6.4 NLTP1_WHEAT
12 HHSearch 83.5360%-118 - C2 -1T12 - NLTP1_TOBAC -
14 HHSearch 79.8259%-115 - C2 -2ALG 3.7 NLTP1_PRUPE
15 HHSearch 76.7952%-119 - C2 -1SIY - NLTP1_VIGRR -
24 HHSearch 54.2122%-140 - C2 -1BEA - ITRF_MAIZE -
32 SP3 53.8119%-117 - C2 -1HSS - IAA1_WHEAT -
25 HHSearch 53.2525%-107 - C2 -1SM7 - ? -
27 HHSearch 47.2126% -91 - C2 -1PSY - 2SS_RICCO -
3 Fugue 47.1233%-104 - C2 -1L6H - NLTPX_ORYSJ -
4 Fugue 46.1524% -44 - C2 -1PSY - 2SS_RICCO -
36 SP3 44.5816% -98 - C2 -1QPO - NADC_MYCTU -
22 HHSearch 43.8418% -99 - C2 -1B1U - IAAT_ELECO -
23 HHSearch 43.6315%-105 - C2 -1S6D - 2SS8_HELAN -
17 HHSearch 42.4820% -93 - C2 -2RKN - DIRL1_ARATH -
2 Fugue 42.1822% -82 - C2 -2RKN - DIRL1_ARATH -
26 HHSearch 41.4520% -77 - C2 -3OB4 - ? -
30 SP3 40.8022% -84 - C2 -1L6H - NLTPX_ORYSJ -
9 Fugue 40.6418% -47 - C2 -1HSS - IAA1_WHEAT -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
41 93.63100%-118 - C- -M041 - -
40 92.63100%-112 - C- -M040 - -
38 92.50100%-112 - C- -M038 - -
44 89.57100%-116 - C- -M044 - -