@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-08 )
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLKNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
29 SP3 95.2498%-108 - C2 -1FK5 6.2 NLTP_MAIZE
11 HHSearch 90.7199%-112 - C2 -1AFH - NLTP_MAIZE -
12 HHSearch 82.2760%-116 - C2 -1T12 - NLTP1_TOBAC -
16 HHSearch 82.1758%-110 - C2 -1BWO 6.7 NLTP1_WHEAT
14 HHSearch 80.2659%-115 - C2 -2ALG 3.8 NLTP1_PRUPE
15 HHSearch 79.3952%-119 - C2 -1SIY - NLTP1_VIGRR -
26 HHSearch 54.7725%-116 - C2 -1SM7 - ? -
23 HHSearch 53.4822%-141 - C2 -1BEA - ITRF_MAIZE -
32 SP3 51.7619%-116 - C2 -1HSS - IAA1_WHEAT -
4 Fugue 49.1025% -44 - C2 -1PSY - 2SS_RICCO -
27 HHSearch 48.0726% -92 - C2 -1PSY - 2SS_RICCO -
36 SP3 44.5016% -98 - C2 -1QPO - NADC_MYCTU -
3 Fugue 43.4528%-105 - C2 -1L6H - NLTPX_ORYSJ -
22 HHSearch 43.4418% -99 - C2 -1B1U - IAAT_ELECO -
2 Fugue 41.8422% -81 - C2 -2RKN - DIRL1_ARATH -
24 HHSearch 41.6215% -94 - C2 -1S6D - 2SS8_HELAN -
17 HHSearch 41.4020% -93 - C2 -2RKN - DIRL1_ARATH -
30 SP3 40.1722% -84 - C2 -1L6H - NLTPX_ORYSJ -
25 HHSearch 39.1220% -69 - C2 -3OB4 - ? -
10 Fugue 38.7418% -44 - C2 -1HSS - IAA1_WHEAT -


User Run . : Multi Template Modeling Result:

(2 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
38 90.50100%-106 - C- -M038 - -
42 89.33100%-113 - C- -M042 - -