@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : 451_tII_MAIZE: (2014-05-08 )
ASCNAGQLAACAPAITAGATPSASCCSNLKAQQGCFCQFVKNPTYGRYINSPNARKVVASCGVSVPRC

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGM_B_2(1N89)
NLT2G_WHEAT
[Raw transfer]
2 HHSearch 93.6668%-131 - C1 -1L6H - NLTPX_ORYSJ -
28 SP3 93.0467%-131 - C1 -1L6H - NLTPX_ORYSJ -
18 Fugue 93.0467%-131 * C1 *1L6H - NLTPX_ORYSJ -
1 HHSearch 91.5263%-118 - C1 -1N89 6.4 NLT2G_WHEAT
19 Fugue 75.2926%-115 - C1 -2RKN - DIRL1_ARATH -
3 HHSearch 72.4027%-121 - C1 -2RKN - DIRL1_ARATH -
8 HHSearch 65.3135%-103 - C1 -1AFH - NLTP_MAIZE -
29 SP3 62.9229% -91 - C1 -1FK5 - NLTP_MAIZE -
9 HHSearch 61.9835%-106 - C1 -1T12 - NLTP1_TOBAC -
5 HHSearch 61.9232% -94 - C1 -2ALG - NLTP1_PRUPE -
4 HHSearch 61.0230% -74 - C1 -1BWO - NLTP1_WHEAT -
10 HHSearch 59.8725%-125 - C1 -1HYP - HPSE_SOYBN -
30 SP3 58.7313% -99 - C1 -1U78 - TC3A_CAEEL -
7 HHSearch 58.2631% -84 - C1 -1SIY - NLTP1_VIGRR -
21 Fugue 55.2619%-104 - C1 -2LSE - ? -
31 SP3 53.5519% -89 - C1 -1KNG - CYCY_BRADU -
37 SP3 48.6314% -98 - C1 -1F9M - TRXF_SPIOL -
36 SP3 46.7314% -79 - C1 -1XFL - TRXH1_ARATH -
22 Fugue 46.6716% -83 - C1 -3FBI - MED31_YEAST -
25 Fugue 45.7317% -58 - C1 -1G12 - -


User Run . : Multi Template Modeling Result:

(2 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGM_B_2(1N89)
NLT2G_WHEAT
[Raw transfer]
43 94.61100%-136 - C- -M043 - -
42 94.26100%-123 - C- -M042 - -