@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-09 )
ITCGQVSSNLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVNIPYQISPSTNCANVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]
21 HHSearch 94.6295%-125 - C2 -2ALG 3.6 NLTP1_PRUPE
24 HHSearch 86.2657%-116 - C2 -1T12 - NLTP1_TOBAC -
11 SP3 84.8559%-109 - C2 -1FK5 5.6 NLTP_MAIZE
26 HHSearch 80.3847%-121 - C2 -1BWO 6.7 NLTP1_WHEAT
23 HHSearch 79.0160%-113 - C2 -1SIY - NLTP1_VIGRR -
22 HHSearch 77.8159%-106 - C2 -1AFH - NLTP_MAIZE -
39 HHSearch 62.8825%-139 - C2 -1HSS - IAA1_WHEAT -
36 HHSearch 59.4230%-121 - C2 -1SM7 - ? -
34 HHSearch 55.8124%-134 - C2 -1BEA - ITRF_MAIZE -
40 HHSearch 55.7421%-102 - C2 -1W2Q - CONG_ARAHY -
19 SP3 53.8121%-136 - C2 -1HSS - IAA1_WHEAT -
35 HHSearch 48.9726% -77 - C2 -3OB4 - ? -
32 HHSearch 48.1219%-122 - C2 -1B1U - IAAT_ELECO -
33 HHSearch 47.2223% -80 - C2 -1PSY - 2SS_RICCO -
27 HHSearch 46.9029% -95 - C2 -2RKN - DIRL1_ARATH -
38 HHSearch 45.4721% -86 - C2 -2LVF - ? -
2 Fugue 43.2128% -81 - C2 -2RKN - DIRL1_ARATH -
5 Fugue 43.1714% -68 - C2 -1W2Q - CONG_ARAHY -
6 Fugue 43.1521% -73 - C2 -1PSY - 2SS_RICCO -
13 SP3 43.0921% -69 - C2 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]
46 96.13100%-124 - C- -M046 - -
42 95.74100%-120 - C- -M042 - -
41 94.67100%-128 - C- -M041 - -
45 94.39100%-126 - C- -M045 - -