@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-09 )
AISCGQVQSSLVACIPYLRSGGSPTQACCNGVKSLNNAAKTTADRQAACECLKTAAGSISGLSPANAASLPGKCGVNVPYKISTSTNCKNVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
12 HHSearch 90.7460%-113 - C1 -1T12 - NLTP1_TOBAC -
29 SP3 90.0364%-108 - C1 -1FK5 5.2 NLTP_MAIZE
11 HHSearch 89.9963%-105 - C1 -2ALG 3.8 NLTP1_PRUPE
15 HHSearch 88.4557%-115 - C1 -1SIY - NLTP1_VIGRR -
13 HHSearch 86.9264%-103 - C1 -1AFH - NLTP_MAIZE -
16 HHSearch 83.4448%-117 - C1 -1BWO 6.5 NLTP1_WHEAT
28 HHSearch 63.0826%-146 - C1 -1HSS - IAA1_WHEAT -
23 HHSearch 58.3021%-133 - C1 -1BEA - ITRF_MAIZE -
34 SP3 55.3420%-113 * C1 *1HSS - IAA1_WHEAT -
26 HHSearch 53.9433%-115 - C1 -1SM7 - ? -
10 Fugue 52.8724% -84 - C1 -1S6D - 2SS8_HELAN -
5 Fugue 52.6323% -94 - C1 -1HSS - IAA1_WHEAT -
17 HHSearch 50.6331%-101 - C1 -2RKN - DIRL1_ARATH -
4 Fugue 49.4327% -35 - C1 -1PSY - 2SS_RICCO -
22 HHSearch 48.8919%-122 - C1 -1B1U - IAAT_ELECO -
24 HHSearch 48.2033% -84 - C1 -1PSY - 2SS_RICCO -
2 Fugue 47.6529% -77 - C1 -2RKN - DIRL1_ARATH -
35 SP3 46.3719%-102 - C1 -1QPO - NADC_MYCTU -
25 HHSearch 42.1426% -59 - C1 -3OB4 - ? -
31 SP3 38.0516% -53 - C1 -1DLY - TRHN1_CHLMO -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
39 95.70100%-123 - C- -M039 - -
45 94.17100%-114 - C- -M045 - -
43 92.72100%-119 - C- -M043 - -
40 91.40100%-107 - C- -M040 - -
46 88.94100%-113 - C- -M046 - -