@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-10 )
AISCNQVINTLTPCISYVVGNGALTGNCCNAIRGLNSAARTTPDRQSVCTCLKNTASQFSYNSRNVALAAGLPGKCGVKLPYKIDPSTDCKSVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
20 HHSearch 92.2754%-128 - C2 -2ALG 4.1 NLTP1_PRUPE
10 SP3 90.1251%-126 - C2 -1FK5 4.9 NLTP_MAIZE
21 HHSearch 89.8752%-121 - C2 -1T12 - NLTP1_TOBAC -
25 HHSearch 85.5042%-130 - C2 -1BWO - NLTP1_WHEAT -
24 HHSearch 78.8841%-130 - C2 -1SIY - NLTP1_VIGRR -
22 HHSearch 77.6252%-119 - C2 -1AFH - NLTP_MAIZE -
35 HHSearch 62.1026%-137 - C2 -1SM7 - ? -
5 Fugue 58.2719%-111 - C2 -1S6D - 2SS8_HELAN -
32 HHSearch 54.7925%-136 * C2 *1BEA - ITRF_MAIZE -
40 HHSearch 51.3416%-144 - C2 -1HSS - IAA1_WHEAT -
30 HHSearch 51.2317%-125 - C2 -1B1U - IAAT_ELECO -
38 HHSearch 50.9418%-113 - C2 -1W2Q - CONG_ARAHY -
2 Fugue 50.1721% -86 - C2 -2RKN - DIRL1_ARATH -
26 HHSearch 50.1323%-113 - C2 -2RKN - DIRL1_ARATH -
13 SP3 49.8814%-124 - C2 -1HSS - IAA1_WHEAT -
37 HHSearch 46.4622%-108 - C2 -2LVF - ? -
6 Fugue 44.2614% -44 - C2 -1PSY - 2SS_RICCO -
34 HHSearch 43.4321% -86 - C2 -1PSY - 2SS_RICCO -
4 Fugue 42.9723% -83 - C2 -1L6H - NLTPX_ORYSJ -
36 HHSearch 42.7521%-103 - C2 -1S6D - 2SS8_HELAN -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
45 40.75100% -21 - C- -M045 - -
47 39.46100% -21 - C- -M047 - -
41 36.46100% -15 - C- -M041 - -