@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-10 )
AISCGTVVSKLAPCLGFLRGGGSPPPACCSGIRNLQSMARSTPDRQAACGCLKSASAGVNMRNAAALPGKCGVNIGYPISRSVDCSRVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]




19 HHSearch 95.4665%-123 - C5 -2ALG 3.8 NLTP1_PRUPE
21 HHSearch 93.9058%-126 - C5 -1T12 - NLTP1_TOBAC -
11 SP3 89.1260%-107 - C5 -1FK5 5.6 NLTP_MAIZE
20 HHSearch 88.7961%-108 - C5 -1AFH - NLTP_MAIZE -
23 HHSearch 88.3452%-117 - C5 -1SIY - NLTP1_VIGRR -
24 HHSearch 86.1551%-117 - C5 -1BWO 5.8 NLTP1_WHEAT
33 HHSearch 62.8528%-111 - C5 -1SM7 - ? -
2 Fugue 59.2828% -89 - C5 -2RKN - DIRL1_ARATH -
32 HHSearch 58.6422%-119 - C5 -1BEA - ITRF_MAIZE -
34 HHSearch 58.1221% -83 - C5 -1PSY - 2SS_RICCO -
5 Fugue 56.3121% -64 - C5 -1PSY - 2SS_RICCO -
25 HHSearch 53.4529% -95 - C5 -2RKN - DIRL1_ARATH -
30 HHSearch 52.6515%-119 - C5 -1B1U - IAAT_ELECO -
26 HHSearch 50.4837% -87 - C5 -1L6H - NLTPX_ORYSJ -
3 Fugue 48.6130% -76 - C5 -1L6H - NLTPX_ORYSJ -
31 HHSearch 48.0522%-104 - C5 -1S6D - 2SS8_HELAN -
9 Fugue 43.6918% -58 - C5 -1S6D - 2SS8_HELAN -
27 HHSearch 40.7728% -69 - C5 -1N89 - NLT2G_WHEAT -
35 HHSearch 38.3121% -74 - C5 -3OB4 - ? -
12 SP3 36.2713% -72 - C3 -1EHX - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]




37 99.45100%-131 - C- -M037 - -
38 98.07100%-136 - C- -M038 - -
41 97.58100%-130 - C- -M041 - -
43 93.96100%-130 - C- -M043 - -