@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-10 )
ALTCGTVTSALSPCITYVRNGGSVPASCCQGVAALNSAAKTTADRQAACSCLKSALSSVSGIQPSLASSLPGKCGVSIPYQISPSTDCSKVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




11 HHSearch 94.0860%-141 - C2 -2ALG 3.6 NLTP1_PRUPE
32 SP3 92.4960%-138 - C2 -1FK5 5.5 NLTP_MAIZE
15 HHSearch 89.7653%-145 - C2 -1SIY - NLTP1_VIGRR -
13 HHSearch 86.9660%-137 - C2 -1T12 - NLTP1_TOBAC -
12 HHSearch 85.9661%-129 - C2 -1AFH - NLTP_MAIZE -
16 HHSearch 83.7142%-148 - C2 -1BWO - NLTP1_WHEAT -
31 HHSearch 68.5131%-163 - C2 -1HSS - IAA1_WHEAT -
25 HHSearch 65.7229%-154 - C2 -1SM7 - ? -
37 SP3 58.8826%-136 * C2 *1HSS - IAA1_WHEAT -
24 HHSearch 54.0521%-165 - C2 -1BEA - ITRF_MAIZE -
21 HHSearch 53.9125%-117 - C2 -2LVF - ? -
4 Fugue 51.9827%-119 - C2 -1HSS - IAA1_WHEAT -
28 HHSearch 51.6524%-115 - C2 -1PSY - 2SS_RICCO -
17 HHSearch 51.4831%-125 - C2 -2RKN - DIRL1_ARATH -
23 HHSearch 50.5520%-127 - C2 -1B1U - IAAT_ELECO -
8 Fugue 49.4820% -89 - C2 -1PSY - 2SS_RICCO -
29 HHSearch 45.4121% -98 - C2 -1W2Q - CONG_ARAHY -
27 HHSearch 45.2821%-129 - C2 -1S6D - 2SS8_HELAN -
2 Fugue 44.8028% -87 - C2 -2RKN - DIRL1_ARATH -
3 Fugue 43.4323%-114 - C2 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




42 96.77100%-152 - C- -M042 - -
46 96.69100%-152 - C- -M046 - -
47 96.65100%-162 - C- -M047 - -