@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-10 )
ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASNTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIHCSRVS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
30 SP3 90.9774%-117 - C2 -1FK5 6.2 NLTP_MAIZE
16 HHSearch 88.3660%-120 - C2 -1BWO 6.6 NLTP1_WHEAT
12 HHSearch 87.8375%-115 - C2 -1AFH - NLTP_MAIZE -
11 HHSearch 81.5052%-120 - C2 -2ALG 3.8 NLTP1_PRUPE
13 HHSearch 80.4953%-106 - C2 -1T12 - NLTP1_TOBAC -
14 HHSearch 75.6841%-116 - C2 -1SIY - NLTP1_VIGRR -
25 HHSearch 59.0024%-117 - C2 -1SM7 - ? -
23 HHSearch 55.4021%-123 - C2 -1BEA - ITRF_MAIZE -
29 HHSearch 55.0722%-122 * C2 *1HSS - IAA1_WHEAT -
34 SP3 51.5020%-111 - C3 -1QPO - NADC_MYCTU -
37 SP3 51.2520%-111 - C3 -1QPO - NADC_MYCTU -
2 Fugue 50.6623% -81 - C2 -2RKN - DIRL1_ARATH -
36 SP3 49.5020%-110 - C2 -1HSS - IAA1_WHEAT -
26 HHSearch 49.4630% -83 - C2 -1PSY - 2SS_RICCO -
22 HHSearch 46.7516% -95 - C2 -1B1U - IAAT_ELECO -
17 HHSearch 46.3521% -69 - C2 -2RKN - DIRL1_ARATH -
3 Fugue 45.6930% -94 - C2 -1L6H - NLTPX_ORYSJ -
32 SP3 41.2024% -89 - C2 -1L6H - NLTPX_ORYSJ -
18 HHSearch 40.3233% -80 - C2 -1L6H - NLTPX_ORYSJ -
35 SP3 39.1912% -81 - C3 -1O4U - ? -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
40 95.74100%-131 - C- -M040 - -
42 92.84100%-128 - C- -M042 - -
44 91.24100%-126 - C- -M044 - -