@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-10 )
AISCGQVSSALGPCLSYARGNGASPSAACCSGVRRLAGQVQTAADKKAACLCIKSAAGGVKEGTAAEIPSKCRVSVPYKISSTVNCNKI

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
31 SP3 96.4859%-117 - C5 -1FK5 5.9 NLTP_MAIZE
11 HHSearch 95.1760%-116 - C5 -1AFH - NLTP_MAIZE -
15 HHSearch 88.8743%-121 - C5 -1BWO - NLTP1_WHEAT -
12 HHSearch 87.4852%-120 - C5 -1T12 - NLTP1_TOBAC -
14 HHSearch 86.5947%-120 - C5 -2ALG 2.4 NLTP1_PRUPE
16 HHSearch 83.8740%-124 - C5 -1SIY - NLTP1_VIGRR -
25 HHSearch 62.4125%-113 - C5 -1SM7 - ? -
4 Fugue 59.1628% -75 - C5 -1PSY - 2SS_RICCO -
24 HHSearch 58.4321%-133 - C5 -1BEA - ITRF_MAIZE -
23 HHSearch 55.0822%-117 - C5 -1S6D - 2SS8_HELAN -
2 Fugue 53.4427% -86 - C5 -2RKN - DIRL1_ARATH -
27 HHSearch 53.3927% -75 - C5 -1PSY - 2SS_RICCO -
17 HHSearch 51.9026% -74 - C5 -2RKN - DIRL1_ARATH -
3 Fugue 50.4330% -69 - C5 -1L6H - NLTPX_ORYSJ -
22 HHSearch 48.4818% -90 - C5 -1B1U - IAAT_ELECO -
32 SP3 47.3621% -67 - C5 -1L6H - NLTPX_ORYSJ -
5 Fugue 44.1716% -39 - C5 -1S6D - 2SS8_HELAN -
18 HHSearch 43.7932% -73 - C5 -1L6H - NLTPX_ORYSJ -
19 HHSearch 43.1128% -47 - C5 -1N89 - NLT2G_WHEAT -
26 HHSearch 42.4013% -79 - C5 -3OB4 - ? -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
43 99.85100%-137 - C- -M043 - -
41 97.74100%-122 - C- -M041 - -
45 95.67100%-137 - C- -M045 - -