@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-11 )
AITCSQVSSYLAPCIPYLRGSGGAVPSNCCSGIKNLNGAAQTSQDRKAACGCIKNAAGSISGINYALASQMPSKCGVSIPYQISPNIDCNSVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
32 SP3 94.9756%-142 - C3 -1FK5 5.6 NLTP_MAIZE
13 HHSearch 92.9358%-142 - C3 -2ALG 4.1 NLTP1_PRUPE
16 HHSearch 91.1651%-135 - C3 -1SIY - NLTP1_VIGRR -
11 HHSearch 88.5657%-132 - C3 -1AFH - NLTP_MAIZE -
12 HHSearch 87.6556%-133 - C3 -1T12 - NLTP1_TOBAC -
15 HHSearch 87.6343%-152 - C3 -1BWO 3.7 NLTP1_WHEAT
5 Fugue 61.9526%-112 - C3 -1S6D - 2SS8_HELAN -
30 HHSearch 59.5323%-149 * C3 *1HSS - IAA1_WHEAT -
22 HHSearch 56.8624%-140 - C3 -1S6D - 2SS8_HELAN -
25 HHSearch 54.2725%-132 - C3 -1SM7 - ? -
20 HHSearch 51.2016%-144 - C3 -1BEA - ITRF_MAIZE -
31 HHSearch 50.8827%-120 - C3 -2LVF - ? -
27 HHSearch 48.6929% -98 - C3 -1PSY - 2SS_RICCO -
17 HHSearch 48.6325%-105 - C3 -2RKN - DIRL1_ARATH -
3 Fugue 48.2126% -41 - C3 -1PSY - 2SS_RICCO -
2 Fugue 47.3724% -98 - C3 -2RKN - DIRL1_ARATH -
4 Fugue 46.2220% -80 - C3 -4HR1 - ? -
24 HHSearch 43.7015%-125 - C3 -1B1U - IAAT_ELECO -
8 Fugue 42.9724% -95 - C3 -1L6H - NLTPX_ORYSJ -
41 SP3 42.3715% -95 - C3 -1B0A - FOLD_ECOLI -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
47 94.95100%-160 - C- -M047 - -
46 93.21100%-146 - C- -M046 - -
48 91.50100%-153 - C- -M048 - -