@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : 621_tIV_THECC: (2014-05-12 )
QTICNMPASGLMACKPAVTPPNPPPPTSTCCSALSQADMRCLCSYKNSQLLPSLGIDPNLAMKLPSMCKLPHPANC

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LP3_A_5(2RKN)
DIRL1_ARATH
[Raw transfer]




LP3_A_6(2RKN)
DIRL1_ARATH
[Raw transfer]




11 HHSearch 98.8347%-150 - C3 -2RKN - DIRL1_ARATH -
1 Fugue 98.8247%-150 - C3 -2RKN 5.5 DIRL1_ARATH
35 SP3 75.2023%-149 - C3 -1HSS - IAA1_WHEAT -
18 HHSearch 68.2728%-115 - C3 -1T12 - NLTP1_TOBAC -
19 HHSearch 67.1430%-122 - C3 -2ALG - NLTP1_PRUPE -
24 HHSearch 66.2426%-119 - C3 -1BEA - ITRF_MAIZE -
32 SP3 65.1023%-114 - C3 -1FK5 - NLTP_MAIZE -
23 HHSearch 63.3424%-101 - C3 -1HSS - IAA1_WHEAT -
15 HHSearch 62.5521% -99 - C3 -1BWO - NLTP1_WHEAT -
17 HHSearch 60.2627%-112 - C3 -1SIY - NLTP1_VIGRR -
28 HHSearch 58.6925%-103 - C3 -2LVF - ? -
12 HHSearch 57.9928%-120 - C3 -1N89 - NLT2G_WHEAT -
2 Fugue 57.5628%-103 - C3 -1L6H - NLTPX_ORYSJ -
14 HHSearch 56.5127% -89 - C3 -1AFH - NLTP_MAIZE -
26 HHSearch 55.5125% -94 - C3 -1SM7 - ? -
30 HHSearch 54.9720% -90 * C3 *1B1U - IAAT_ELECO -
22 HHSearch 52.0222% -94 - C3 -1S6D - 2SS8_HELAN -
6 Fugue 51.1622% -80 - C3 -1S6D - 2SS8_HELAN -
34 SP3 50.6717%-129 - C3 -1HYP - ? -
39 SP3 50.5118%-111 - C3 -1K6K - CLPA_ECOLI -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LP3_A_5(2RKN)
DIRL1_ARATH
[Raw transfer]




LP3_A_6(2RKN)
DIRL1_ARATH
[Raw transfer]




49 96.30100%-163 - C- -M049 - -
43 93.42100%-158 - C- -M043 - -
48 91.79100%-159 - C- -M048 - -