@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-12 )
AITCEEVTYYLIPCIGYGVFGGTVAPSCCTGIKTLDAAAKTTEDRREKCNCVKEGAARIPGLNYTRVNEIPGLRGTTCPYKVTPDVDCSKVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




25 HHSearch 96.1540% -90 - C1 -1SIY - NLTP1_VIGRR -
11 SP3 93.8142%-106 - C1 -1FK5 4.3 NLTP_MAIZE
21 HHSearch 93.6941%-105 - C1 -2ALG - NLTP1_PRUPE -
23 HHSearch 91.5044% -87 - C1 -1T12 - NLTP1_TOBAC -
26 HHSearch 89.5936%-103 - C1 -1BWO - NLTP1_WHEAT -
22 HHSearch 86.9842% -88 - C1 -1AFH - NLTP_MAIZE -
32 HHSearch 54.9825% -72 - C1 -1PSY - 2SS_RICCO -
35 HHSearch 54.5519% -96 - C1 -1SM7 - ? -
36 HHSearch 51.9913% -90 - C1 -1BEA - ITRF_MAIZE -
2 Fugue 47.2320% -60 - C1 -2RKN - DIRL1_ARATH -
37 HHSearch 46.8916% -92 - C1 -1S6D - 2SS8_HELAN -
16 SP3 46.2714% -84 - C1 -1HSS - IAA1_WHEAT -
38 HHSearch 44.8218% -69 - C1 -2LVF - ? -
27 HHSearch 44.4216% -76 - C1 -2RKN - DIRL1_ARATH -
33 HHSearch 43.5616% -52 - C1 -1B1U - IAAT_ELECO -
39 HHSearch 43.2814% -68 - C1 -1W2Q - CONG_ARAHY -
29 HHSearch 42.5315% -72 - C1 -1N89 - NLT2G_WHEAT -
19 SP3 40.1513% -67 - C1 -1QPO - NADC_MYCTU -
15 SP3 38.0114% -43 - C1 -1NGK - TRHBO_MYCTU -
14 SP3 37.7415% -59 - C1 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




44 99.37100%-119 - C- -M044 - -
47 98.21100%-118 - C- -M047 - -
46 91.81100%-107 - C- -M046 - -