@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-12 )
AVTGCGQVVSALAPCIGYATGGAASPSARCCSGVRGLNSAASSPADRKTACTCLKQQTSGMGGIRPDLVAGIPGKCGVNIPYAISPSTDCSKVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
21 HHSearch 90.1153%-122 - C2 -1T12 - NLTP1_TOBAC -
23 HHSearch 89.0949%-113 - C2 -2ALG 2.5 NLTP1_PRUPE
11 SP3 88.1357%-109 - C2 -1FK5 5.9 NLTP_MAIZE
25 HHSearch 87.3347%-107 - C2 -1BWO - NLTP1_WHEAT -
20 HHSearch 86.7658%-106 - C2 -1AFH - NLTP_MAIZE -
24 HHSearch 84.4943%-121 - C2 -1SIY - NLTP1_VIGRR -
33 HHSearch 54.1622%-148 - C2 -1BEA - ITRF_MAIZE -
18 SP3 54.0120%-113 - C2 -1HSS - IAA1_WHEAT -
26 HHSearch 50.3925%-111 - C2 -2RKN - DIRL1_ARATH -
35 HHSearch 50.3020%-117 - C2 -1SM7 - ? -
36 HHSearch 50.0218%-100 - C2 -1PSY - 2SS_RICCO -
2 Fugue 48.3627% -94 - C2 -2RKN - DIRL1_ARATH -
9 Fugue 47.7419% -54 - C2 -1S6D - 2SS8_HELAN -
8 Fugue 47.4818% -55 - C2 -1PSY - 2SS_RICCO -
3 Fugue 45.8330%-102 - C2 -1L6H - NLTPX_ORYSJ -
34 HHSearch 44.8422% -70 - C2 -3OB4 - ? -
32 HHSearch 43.6017% -99 - C2 -1B1U - IAAT_ELECO -
30 HHSearch 43.2616%-103 - C2 -1S6D - 2SS8_HELAN -
16 SP3 40.4222% -91 - C2 -1L6H - NLTPX_ORYSJ -
7 Fugue 40.1223% -52 - C2 -2H2M - COMD1_HUMAN -


User Run . : Multi Template Modeling Result:

(2 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
44 41.26100% 0 - C- -M044 - -
39 40.69100% 8 - C- -M039 - -