@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-13 )
AISCSAVYSTLMPCLQFVQGGGAPSRGCCSGIQSLLAEANNTPDRRTICGCLKNVANGASGGPYITRAAALPSKCNVALPYKISPDVNCDSIH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
11 SP3 93.4748%-143 - C2 -1FK5 - NLTP_MAIZE -
23 HHSearch 91.1549%-131 - C2 -1AFH - NLTP_MAIZE -
22 HHSearch 90.6744%-139 - C2 -1T12 - NLTP1_TOBAC -
21 HHSearch 87.2645%-149 - C2 -2ALG 2.8 NLTP1_PRUPE
25 HHSearch 86.9442%-143 - C2 -1SIY - NLTP1_VIGRR -
26 HHSearch 85.4341%-145 - C2 -1BWO 4.8 NLTP1_WHEAT
36 HHSearch 67.0828%-143 - C2 -1BEA - ITRF_MAIZE -
39 HHSearch 65.3719%-137 - C2 -1W2Q - CONG_ARAHY -
38 HHSearch 63.5427%-143 - C2 -1SM7 - ? -
40 HHSearch 61.7920%-153 * C2 *1HSS - IAA1_WHEAT -
31 HHSearch 57.5421%-154 - C2 -1S6D - 2SS8_HELAN -
4 Fugue 56.0617%-100 - C2 -1S6D - 2SS8_HELAN -
27 HHSearch 54.9927%-110 - C2 -2RKN - DIRL1_ARATH -
2 Fugue 54.3628%-109 - C2 -2RKN - DIRL1_ARATH -
13 SP3 52.8513%-150 - C2 -1HSS - IAA1_WHEAT -
34 HHSearch 52.3218%-135 - C2 -1B1U - IAAT_ELECO -
35 HHSearch 50.2722%-115 - C2 -3OB4 - ? -
37 HHSearch 49.7918% -77 - C2 -1PSY - 2SS_RICCO -
32 HHSearch 49.2321%-122 - C2 -2LVF - ? -
8 Fugue 46.8715% -59 - C2 -1PSY - 2SS_RICCO -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
43 40.00100% 9 - C- -M043 - -
42 38.18100% 7 - C- -M042 - -
46 37.06100% 12 - C- -M046 - -
47 36.43100% 5 - C- -M047 - -