@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-13 )
AISCGQVNSAVGPCLSYARGTGASPSAACCNGVKSLAAAAKSSADKKAACACLKSAAGRMSGLNAGNAAAIPSKCGVSIPYTISPSVDCSRVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 SP3 93.0373%-121 - C1 -1FK5 6.0 NLTP_MAIZE
21 HHSearch 91.1573%-117 - C1 -1AFH - NLTP_MAIZE -
26 HHSearch 88.6354%-128 - C1 -1BWO 6.4 NLTP1_WHEAT
22 HHSearch 84.3159%-112 - C1 -1T12 - NLTP1_TOBAC -
24 HHSearch 82.4848%-130 - C1 -2ALG 3.1 NLTP1_PRUPE
25 HHSearch 78.2542%-119 - C1 -1SIY - NLTP1_VIGRR -
33 HHSearch 58.2120%-141 - C1 -1BEA - ITRF_MAIZE -
16 SP3 55.5120%-119 - C1 -1HSS - IAA1_WHEAT -
37 HHSearch 54.8629% -94 - C1 -1PSY - 2SS_RICCO -
35 HHSearch 54.1725%-103 - C1 -1SM7 - ? -
8 Fugue 51.1029% -35 - C1 -1PSY - 2SS_RICCO -
9 Fugue 50.1623% -75 - C1 -1S6D - 2SS8_HELAN -
36 HHSearch 48.0620% -90 - C1 -3OB4 - ? -
3 Fugue 47.8430% -97 - C1 -1L6H - NLTPX_ORYSJ -
17 SP3 46.8321%-106 - C1 -1QPO - NADC_MYCTU -
32 HHSearch 46.3915%-114 - C1 -1B1U - IAAT_ELECO -
2 Fugue 44.7125% -79 - C1 -2RKN - DIRL1_ARATH -
34 HHSearch 44.6318%-102 - C1 -1S6D - 2SS8_HELAN -
27 HHSearch 44.0425% -85 - C1 -2RKN - DIRL1_ARATH -
13 SP3 43.4420%-103 - C1 -1QPO - NADC_MYCTU -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
39 97.86100%-130 - C- -M039 - -
44 96.35100%-132 - C- -M044 - -
45 94.93100%-129 - C- -M045 - -
46 94.72100%-134 - C- -M046 - -