@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-13 )
AISCGQVSSSLAQCIGYLQKGGAVPAACCSGLKGLNSAATTTADRQGVCNCLKSLAGKISGINYGVAAGLPSKCGVSISYKISPSTDCKSVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
21 HHSearch 94.4263%-134 - C3 -1T12 - NLTP1_TOBAC -
11 SP3 93.2559%-128 - C3 -1FK5 4.3 NLTP_MAIZE
20 HHSearch 89.9261%-134 - C3 -2ALG 3.9 NLTP1_PRUPE
24 HHSearch 87.8757%-125 - C3 -1SIY - NLTP1_VIGRR -
22 HHSearch 84.5160%-128 - C3 -1AFH - NLTP_MAIZE -
25 HHSearch 80.6042%-145 - C3 -1BWO - NLTP1_WHEAT -
39 HHSearch 69.2725%-183 * C3 *1HSS - IAA1_WHEAT -
14 SP3 60.6321%-156 - C3 -1HSS - IAA1_WHEAT -
7 Fugue 60.6225%-111 - C3 -1S6D - 2SS8_HELAN -
33 HHSearch 60.4329%-145 - C3 -1SM7 - ? -
32 HHSearch 55.7624%-166 - C3 -1BEA - ITRF_MAIZE -
36 HHSearch 55.1725%-140 - C3 -1S6D - 2SS8_HELAN -
26 HHSearch 54.9924%-105 - C3 -2RKN - DIRL1_ARATH -
40 HHSearch 53.9426%-117 - C3 -2LVF - ? -
2 Fugue 53.5325% -92 - C3 -2RKN - DIRL1_ARATH -
35 HHSearch 51.8025%-103 - C3 -1PSY - 2SS_RICCO -
8 Fugue 51.5621% -50 - C3 -1PSY - 2SS_RICCO -
4 Fugue 49.6924%-106 - C3 -1HSS - IAA1_WHEAT -
31 HHSearch 49.1519%-146 - C3 -1B1U - IAAT_ELECO -
38 HHSearch 47.1217%-116 - C3 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
47 94.99100%-134 - C- -M047 - -
46 93.73100%-138 - C- -M046 - -
42 93.73100%-138 - C- -M042 - -
41 92.94100%-143 - C- -M041 - -
45 92.65100%-143 - C- -M045 - -