@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-15 )
ATCGQLIDSLIPCITYLQGGPGPSAACCGGVKKLNAAANTGPARKAACNCLKSAAGTIARLNNNQAAALPGKCGVKIPYKFSTSTNCNSIRF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




13 HHSearch 94.1251%-119 - C2 -1T12 - NLTP1_TOBAC -
12 HHSearch 91.9154%-112 - C2 -2ALG 4.7 NLTP1_PRUPE
32 SP3 89.5951%-112 - C2 -1FK5 5.5 NLTP_MAIZE
16 HHSearch 88.4144%-113 - C2 -1BWO 3.6 NLTP1_WHEAT
14 HHSearch 86.3054%-111 - C2 -1SIY - NLTP1_VIGRR -
15 HHSearch 85.4052%-103 - C2 -1AFH - NLTP_MAIZE -
6 Fugue 62.6222%-108 - C2 -1S6D - 2SS8_HELAN -
27 HHSearch 62.3425%-121 - C2 -1SM7 - ? -
29 HHSearch 60.9820%-142 - C2 -1HSS - IAA1_WHEAT -
30 HHSearch 59.1918%-109 - C2 -1W2Q - CONG_ARAHY -
24 HHSearch 58.1321%-135 - C2 -1BEA - ITRF_MAIZE -
9 Fugue 55.6618%-108 - C2 -1HSS - IAA1_WHEAT -
25 HHSearch 53.0026% -90 - C2 -1PSY - 2SS_RICCO -
31 HHSearch 50.8416%-117 - C2 -2LVF - ? -
4 Fugue 49.1722% -64 - C2 -1PSY - 2SS_RICCO -
2 Fugue 47.8324% -70 - C2 -2RKN - DIRL1_ARATH -
23 HHSearch 47.2523% -83 - C2 -1S6D - 2SS8_HELAN -
17 HHSearch 46.3524% -84 - C2 -2RKN - DIRL1_ARATH -
22 HHSearch 45.8714%-119 * C2 *1B1U - IAAT_ELECO -
7 Fugue 45.7313% -65 - C2 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




41 96.34100%-123 - C- -M041 - -
42 96.25100%-130 - C- -M042 - -
40 93.73100%-124 - C- -M040 - -
45 93.15100%-124 - C- -M045 - -