@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-15 )
VTCGQVVGFLTPCITYLQGGPGPSAACCGGVKKLNGAANTGPARKTACNCLKRAAGNIARLNNNQAAALPGKCGVNIPYKFSTSTNCNSIRF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
23 HHSearch 93.9156%-121 - C2 -1SIY - NLTP1_VIGRR -
20 HHSearch 93.8453%-115 - C2 -2ALG 4.6 NLTP1_PRUPE
21 HHSearch 91.1252%-120 - C2 -1T12 - NLTP1_TOBAC -
24 HHSearch 89.8147%-121 - C2 -1BWO 3.5 NLTP1_WHEAT
11 SP3 87.9751%-118 - C2 -1FK5 5.2 NLTP_MAIZE
22 HHSearch 85.3352%-112 - C2 -1AFH - NLTP_MAIZE -
5 Fugue 63.5722%-116 - C2 -1S6D - 2SS8_HELAN -
38 HHSearch 63.2718%-150 * C2 *1HSS - IAA1_WHEAT -
37 HHSearch 59.9516%-128 - C2 -2LVF - ? -
34 HHSearch 59.1122%-119 - C2 -1SM7 - ? -
31 HHSearch 58.0419%-138 - C2 -1BEA - ITRF_MAIZE -
8 Fugue 57.7818%-107 - C2 -1HSS - IAA1_WHEAT -
39 HHSearch 55.0920%-104 - C2 -1W2Q - CONG_ARAHY -
33 HHSearch 52.8525% -91 - C2 -1PSY - 2SS_RICCO -
35 HHSearch 52.1123%-118 - C2 -1S6D - 2SS8_HELAN -
4 Fugue 51.9022% -50 - C2 -1PSY - 2SS_RICCO -
2 Fugue 47.2321% -73 - C2 -2RKN - DIRL1_ARATH -
30 HHSearch 46.8414%-127 - C2 -1B1U - IAAT_ELECO -
25 HHSearch 46.2423% -98 - C2 -2RKN - DIRL1_ARATH -
12 SP3 45.0915% -77 * C3 *1EHX - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
41 96.86100%-135 - C- -M041 - -
40 94.34100%-128 - C- -M040 - -
44 93.58100%-120 - C- -M044 - -
46 90.95100%-129 - C- -M046 - -