@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-15 )
AISCGTVTSALGPCIGYLKGGPGPSPACCGGVKRLNGAAATTPDRQAACNCLKQAAGAISGLNTAAASALPGKCGVNIPYKISTSTNCATIRA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
22 HHSearch 91.2760%-126 - C2 -1T12 - NLTP1_TOBAC -
21 HHSearch 90.7661%-124 - C2 -2ALG 3.8 NLTP1_PRUPE
26 HHSearch 88.6851%-121 - C2 -1BWO 6.7 NLTP1_WHEAT
11 SP3 86.6859%-120 - C2 -1FK5 5.5 NLTP_MAIZE
25 HHSearch 85.3757%-127 - C2 -1SIY - NLTP1_VIGRR -
23 HHSearch 85.1060%-118 - C2 -1AFH - NLTP_MAIZE -
37 HHSearch 57.1927%-116 - C2 -1SM7 - ? -
16 SP3 54.2217%-144 - C2 -1HSS - IAA1_WHEAT -
32 HHSearch 53.5419%-140 - C2 -1BEA - ITRF_MAIZE -
34 HHSearch 52.5721%-107 - C2 -1S6D - 2SS8_HELAN -
7 Fugue 52.5722% -89 - C2 -1S6D - 2SS8_HELAN -
36 HHSearch 50.9227% -83 - C2 -1PSY - 2SS_RICCO -
27 HHSearch 49.5627%-101 - C2 -2RKN - DIRL1_ARATH -
2 Fugue 46.8525% -72 - C2 -2RKN - DIRL1_ARATH -
31 HHSearch 44.7216%-120 - C2 -1B1U - IAAT_ELECO -
6 Fugue 43.2122% -68 - C2 -1PSY - 2SS_RICCO -
17 SP3 39.7518%-110 - C2 -1QPO - NADC_MYCTU -
3 Fugue 39.1427% -87 - C2 -1L6H - NLTPX_ORYSJ -
33 HHSearch 38.3322% -68 - C2 -3OB4 - ? -
19 SP3 38.1318%-109 - C2 -1QPO - NADC_MYCTU -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
44 94.42100%-129 - C- -M044 - -
46 94.06100%-128 - C- -M046 - -
40 94.00100%-126 - C- -M040 - -
41 91.65100%-121 - C- -M041 - -