@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-15 )
AVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNGIRNLNTMAQTTNDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGLPRKCGVNIPYQISPNTDCNSVH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
11 HHSearch 93.3149%-139 - C2 -1T12 - NLTP1_TOBAC -
12 HHSearch 86.9851%-132 - C2 -1AFH - NLTP_MAIZE -
15 HHSearch 86.8946%-142 - C2 -1SIY - NLTP1_VIGRR -
32 SP3 86.2747%-128 - C2 -1FK5 5.3 NLTP_MAIZE
14 HHSearch 84.8349%-132 - C2 -2ALG 3.6 NLTP1_PRUPE
16 HHSearch 83.8543%-129 - C2 -1BWO - NLTP1_WHEAT -
5 Fugue 62.2720%-129 - C2 -1S6D - 2SS8_HELAN -
8 Fugue 59.8521% -96 - C2 -1PSY - 2SS_RICCO -
25 HHSearch 58.6821%-164 - C2 -1BEA - ITRF_MAIZE -
27 HHSearch 58.3923%-131 - C2 -1SM7 - ? -
29 HHSearch 58.0216%-124 - C2 -1W2Q - CONG_ARAHY -
31 HHSearch 56.8617%-159 - C2 -1HSS - IAA1_WHEAT -
2 Fugue 55.9723%-113 - C2 -2RKN - DIRL1_ARATH -
28 HHSearch 54.1822%-147 - C2 -1S6D - 2SS8_HELAN -
17 HHSearch 53.8224%-121 - C2 -2RKN - DIRL1_ARATH -
37 SP3 50.3515%-136 * C2 *1HSS - IAA1_WHEAT -
26 HHSearch 49.6120%-106 - C2 -1PSY - 2SS_RICCO -
23 HHSearch 48.8614%-136 - C2 -1B1U - IAAT_ELECO -
39 SP3 45.5713%-117 - C2 -1QPO - NADC_MYCTU -
21 HHSearch 44.8516%-110 - C2 -2LVF - ? -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
42 37.29100% -8 - C- -M042 - -
43 35.65100% -16 - C- -M043 - -
46 35.10100% -7 - C- -M046 - -