@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-15 )
ALSCPQVQLTVVPCLGYLRNPGPSVPAPCCNGLRGLNNQAKTTPERQSVCRCLKTTAQSLSGLNVPALATLPKKCGVNLPYKISTAIDCNTVKY

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
14 HHSearch 92.8150%-117 - C4 -2ALG 3.7 NLTP1_PRUPE
32 SP3 92.4747%-118 - C4 -1FK5 5.0 NLTP_MAIZE
12 HHSearch 89.7948%-122 - C4 -1AFH - NLTP_MAIZE -
13 HHSearch 89.3849%-117 - C4 -1T12 - NLTP1_TOBAC -
15 HHSearch 87.0244%-128 - C4 -1SIY - NLTP1_VIGRR -
16 HHSearch 85.8744%-129 - C4 -1BWO 5.3 NLTP1_WHEAT
26 HHSearch 64.5228%-140 - C4 -1SM7 - ? -
20 HHSearch 62.1323%-158 - C4 -1BEA - ITRF_MAIZE -
31 HHSearch 59.1320%-138 * C4 *1HSS - IAA1_WHEAT -
6 Fugue 52.2720% -72 - C4 -1PSY - 2SS_RICCO -
28 HHSearch 51.4718% -97 - C4 -1W2Q - CONG_ARAHY -
2 Fugue 50.2922%-101 - C4 -2RKN - DIRL1_ARATH -
17 HHSearch 48.1322% -97 - C4 -2RKN - DIRL1_ARATH -
25 HHSearch 48.0828% -72 - C4 -3OB4 - ? -
4 Fugue 45.7918% -81 - C4 -1S6D - 2SS8_HELAN -
23 HHSearch 45.6818%-112 - C4 -1S6D - 2SS8_HELAN -
21 HHSearch 45.5818%-116 - C4 -1B1U - IAAT_ELECO -
27 HHSearch 44.7221% -85 - C4 -1PSY - 2SS_RICCO -
30 HHSearch 43.6319% -99 - C4 -2LVF - ? -
10 Fugue 41.4524% -78 - C4 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
36 96.77100%-139 - C- -M036 - -
40 95.65100%-135 - C- -M040 - -
41 91.93100%-135 - C- -M041 - -