@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-15 )
APSCPEVQQTLAPCVPYVTHPGPPISPPPPCCNAVKTLNGQSKTTQDRRDVCGCLKSMMGGIPGLNLPAIASLPKDCGVDIGYIISPNMDCNKVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
11 HHSearch 92.7445%-130 - C3 -1AFH - NLTP_MAIZE -
13 HHSearch 90.6548%-131 - C3 -1T12 - NLTP1_TOBAC -
32 SP3 90.2944%-128 * C3 *1FK5 5.5 NLTP_MAIZE
12 HHSearch 86.0542%-122 - C3 -2ALG 2.9 NLTP1_PRUPE
15 HHSearch 85.1543%-116 - C3 -1SIY - NLTP1_VIGRR -
16 HHSearch 80.2739%-124 - C3 -1BWO - NLTP1_WHEAT -
27 HHSearch 63.7126%-161 - C3 -1BEA - ITRF_MAIZE -
23 HHSearch 55.0919%-126 - C3 -1B1U - IAAT_ELECO -
22 HHSearch 54.5426%-135 - C3 -1SM7 - ? -
4 Fugue 54.2020%-114 - C3 -1S6D - 2SS8_HELAN -
17 HHSearch 53.9333%-116 - C3 -2RKN - DIRL1_ARATH -
2 Fugue 53.3132%-102 - C3 -2RKN - DIRL1_ARATH -
28 HHSearch 51.0419%-132 - C3 -1S6D - 2SS8_HELAN -
30 HHSearch 50.3118%-122 - C3 -1W2Q - CONG_ARAHY -
29 HHSearch 48.6222%-111 - C3 -2LVF - ? -
25 HHSearch 44.5324%-114 - C3 -3OB4 - ? -
8 Fugue 42.3218% -40 - C3 -1PSY - 2SS_RICCO -
26 HHSearch 40.4622% -91 - C3 -1PSY - 2SS_RICCO -
21 HHSearch 35.5224%-145 - C3 -2DS2 - ? -
9 Fugue 35.5012% -85 - C3 -3F52 - ? -


User Run . : Multi Template Modeling Result:

(2 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
39 36.92100% 7 - C- -M039 - -
45 36.31100% 6 - C- -M045 - -