@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-15 )
DYTRLMIQVHSYVPFCAYTYDYFSYCLDFLTGYYYKPGKKCCVHIVKLNIIAKHKKENPRLLCNCVEMMTRGYTPPMLADKIQQLPLLCNTHLSFPISSSMDCSTV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMT_A_5(1FK5)
NLTP_MAIZE
[Raw transfer]



FMT_A_4(1FK5)
NLTP_MAIZE
[Raw transfer]
21 HHSearch 93.9426%-139 - C2 -1AFH - NLTP_MAIZE -
11 SP3 87.4322%-145 - C2 -1FK5 3.1 NLTP_MAIZE
25 HHSearch 84.7227%-131 - C2 -1BWO - NLTP1_WHEAT -
23 HHSearch 81.7222%-154 - C2 -2ALG - NLTP1_PRUPE -
22 HHSearch 80.0424%-151 - C2 -1T12 - NLTP1_TOBAC -
26 HHSearch 71.2118%-144 - C2 -1SIY - NLTP1_VIGRR -
30 HHSearch 68.7318%-183 - C2 -1BEA - ITRF_MAIZE -
34 HHSearch 59.5414%-133 - C2 -1PSY - 2SS_RICCO -
32 HHSearch 57.1819%-178 - C2 -1S6D - 2SS8_HELAN -
18 SP3 56.8611%-170 - C2 -1HSS - IAA1_WHEAT -
40 HHSearch 55.9211%-179 * C2 *1HSS - IAA1_WHEAT -
38 HHSearch 55.3617%-173 - C2 -2LVF - ? -
9 Fugue 54.9510%-130 - C2 -1PSY - 2SS_RICCO -
2 Fugue 53.7017%-157 - C2 -2RKN - DIRL1_ARATH -
35 HHSearch 53.0113%-182 - C2 -1SM7 - ? -
27 HHSearch 53.0015%-151 - C2 -2RKN - DIRL1_ARATH -
39 HHSearch 51.0314%-143 - C2 -1B1U - IAAT_ELECO -
36 HHSearch 49.0313%-144 - C2 -1W2Q - CONG_ARAHY -
3 Fugue 47.1924% -70 - C2 -1QYS - ? -
37 HHSearch 47.1816% -93 - C2 -3OB4 - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMT_A_5(1FK5)
NLTP_MAIZE
[Raw transfer]



FMT_A_4(1FK5)
NLTP_MAIZE
[Raw transfer]
47 94.78100%-173 - C- -M047 - -
42 91.67100%-157 - C- -M042 - -
41 91.02100%-170 - C- -M041 - -
48 85.33100%-163 - C- -M048 - -