@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR1A2_THRb: (2016-11-30 )
MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQTTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED

Atome Classification :

(17 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PFA_C_3(1N46)
THB_HUMAN
[Raw transfer]



PFA_D_4(1N46)
THB_HUMAN
[Raw transfer]



G24_B_2(1Q4X)
THB_HUMAN
[Raw transfer]



T3_X_4(4ZO1)
THB_HUMAN
[Raw transfer]



T3_X_8(1XZX)
THB_HUMAN
[Raw transfer]



OEF_A_2(2J4A)
THB_HUMAN
[Raw transfer]



T3_F_6(1BSX)
THB_HUMAN
[Raw transfer]



4HY_A_3(3D57)
THB_HUMAN
[Raw transfer]



T3_E_5(1BSX)
THB_HUMAN
[Raw transfer]



IH5_A_2(1NAX)
THB_HUMAN
[Raw transfer]



T3_E_5(1BSX)
THB_HUMAN
[Raw transfer]



4HY_A_4(2PIN)
THB_HUMAN
[Raw transfer]



T44_X_8(1Y0X)
THB_HUMAN
[Raw transfer]



4HY_A_3(1NQ2)
THB_HUMAN
[Raw transfer]



4HY_A_2(1NQ1)
THB_HUMAN
[Raw transfer]



4HY_A_2(1NQ0)
THB_HUMAN
[Raw transfer]



4HY_B_6(2PIN)
THB_HUMAN
[Raw transfer]
9 PsiBlast_PDB 84.1099%-140 - C1 -2J4A 9.5 THB_HUMAN
10 PsiBlast_PDB 83.78100%-143 - C1 -1NAX 8.7 THB_HUMAN
4 PsiBlast_PDB 83.5199%-150 - C1 -1NQ0 8.7 THB_HUMAN
23 PsiBlast_CBE 83.3299%-142 - C1 -2PIN 8.7 THB_HUMAN
6 PsiBlast_PDB 83.2499%-136 - C1 -1NQ2 7.7 THB_HUMAN
2 PsiBlast_PDB 83.24100%-146 - C1 -1XZX 8.9 THB_HUMAN
13 PsiBlast_PDB 83.2099%-148 - C1 -3D57 9.1 THB_HUMAN
12 PsiBlast_PDB 83.0999%-144 - C1 -2PIN 9.1 THB_HUMAN
3 PsiBlast_PDB 82.86100%-142 - C1 -1Y0X 8.6 THB_HUMAN
7 PsiBlast_PDB 82.75100%-140 - C1 -1N46 9.6 THB_HUMAN
22 PsiBlast_CBE 82.74100%-154 - C1 -1N46 9.3 THB_HUMAN
8 PsiBlast_PDB 82.48100%-148 - C1 -1Q4X 9.9 THB_HUMAN
5 PsiBlast_PDB 82.3399%-138 - C1 -1NQ1 8.6 THB_HUMAN
11 PsiBlast_PDB 82.03100%-144 - C1 -4ZO1 8.9 THB_HUMAN
24 Fugue 81.82100%-148 - C1 -1BSX 8.3 THB_HUMAN
1 PsiBlast_PDB 81.82100%-148 - C1 -1BSX 8.3 THB_HUMAN
21 PsiBlast_CBE 81.60100%-148 - C1 -1BSX 8.2 THB_HUMAN