@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR1F1_RORa: (2016-11-24 )
MNEGAPGDSDLETEARVPWSIMGHCLRTGQARMSATPTPAGEGARRDELFGILQILHQCILSSGDAFVLTGVCCSWRQNGKPPYSQKEDKEVQTGYMNAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNISANGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG

Atome Classification :

(63 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

4D8_A_5(4S15)
RORA_HUMAN
[Raw transfer]




C3S_B_2(1S0X)

[Raw transfer]




4D8_B_7(4S15)

[Raw transfer]




NBH_B_7(4NIE)

[Raw transfer]




NBH_A_5(4NIE)
RORG_HUMAN
[Raw transfer]




CLR_B_2(1N83)

[Raw transfer]




4D8_A_3(4S14)

[Raw transfer]




CLR_B_2(1N83)

[Raw transfer]




ARL_A_3(1NQ7)
RORB_RAT
[Raw transfer]




ARL_A_3(1NQ7)
RORB_RAT
[Raw transfer]




HC2_A_3(3KYT)

[Raw transfer]




HC3_B_6(3L0L)

[Raw transfer]




REA_C_3(1N4H)
RORB_RAT
[Raw transfer]




HC3_A_5(3L0L)
RORG_HUMAN
[Raw transfer]




3QQ_B_8(4WLB)

[Raw transfer]




43V_A_3(4XT9)
?
[Raw transfer]




39K_C_5(4QM0)

[Raw transfer]




DGX_B_4(3B0W)

[Raw transfer]




3QQ_A_5(4WLB)
RORG_HUMAN
[Raw transfer]




3SX_A_4(4WQP)
RORG_HUMAN
[Raw transfer]




3SX_B_6(4WQP)

[Raw transfer]




39K_A_3(4QM0)
RORG_HUMAN
[Raw transfer]




HC9_A_3(3L0J)

[Raw transfer]




DGX_A_3(3B0W)
RORG_HUMAN
[Raw transfer]




3SN_A_5(4WPF)
RORG_HUMAN
[Raw transfer]




4LQ_A_3(5AYG)
RORG_HUMAN
[Raw transfer]




3SN_D_6(4WPF)
RORG_HUMAN
[Raw transfer]




4Q3_D_8(4ZOM)
?
[Raw transfer]




4Q3_A_5(4ZOM)
RORG_HUMAN
[Raw transfer]




4Q3_B_6(4ZOM)

[Raw transfer]




4LQ_B_4(5AYG)

[Raw transfer]




4Q3_C_7(4ZOM)
?
[Raw transfer]




VYI_A_3(5APH)
RORG_HUMAN
[Raw transfer]




VYI_A_3(5APH)
RORG_HUMAN
[Raw transfer]




4P3_D_8(4ZJR)
?
[Raw transfer]




YTZ_A_5(5G44)

[Raw transfer]




STE_C_3(1K4W)
RORB_RAT
[Raw transfer]




6F1_B_18(5IZ0)
?
[Raw transfer]




5RT_A_3(5ETH)

[Raw transfer]




4P3_A_5(4ZJR)

[Raw transfer]




4P3_B_6(4ZJR)
?
[Raw transfer]




76E_A_3(5APJ)

[Raw transfer]




76E_B_5(5APK)
?
[Raw transfer]




444_B_4(4NB6)

[Raw transfer]




6EW_A_3(5IXK)

[Raw transfer]




6EW_B_4(5IXK)
?
[Raw transfer]




5RT_B_4(5ETH)
?
[Raw transfer]




5IM_A_3(5G43)
RORG_HUMAN
[Raw transfer]




4P3_C_7(4ZJR)
?
[Raw transfer]




76E_A_4(5APK)

[Raw transfer]




444_A_5(5EJV)

[Raw transfer]




6F1_A_9(5IZ0)

[Raw transfer]




4TU_A_3(5G42)
RORG_HUMAN
[Raw transfer]




444_B_6(5EJV)
?
[Raw transfer]




6F1_D_25(5IZ0)
?
[Raw transfer]




444_A_3(4NB6)
RORG_HUMAN
[Raw transfer]




4P1_A_3(4ZJW)
RORG_HUMAN
[Raw transfer]




4Y7_A_2(5C4U)

[Raw transfer]




4F1_A_2(4YPQ)

[Raw transfer]




4Y5_A_2(5C4S)
RORG_HUMAN
[Raw transfer]




4F1_A_2(5C4O)
?
[Raw transfer]




A7W_A_3(5G45)

[Raw transfer]




4Y6_A_2(5C4T)

[Raw transfer]




DMS_A_4(5APH)
RORG_HUMAN
[Raw transfer]




2 PsiBlast_PDB 92.78100%-172 - C3 -1N83 8.9
104 HHSearch 92.55100%-174 - C3 -1N83 8.9
3 PsiBlast_PDB 92.06100%-171 - C3 -1S0X 10.2
21 PsiBlast_CBE 90.99100%-161 - C3 -4S15 8.6
1 PsiBlast_PDB 90.59100%-168 - C3 -4S15 9.0 RORA_HUMAN
36 PsiBlast_CBE 81.9653%-177 - C3 -5G44 4.2
106 HHSearch 81.4063%-168 - C3 -1NQ7 8.3 RORB_RAT
10 PsiBlast_PDB 81.3453%-178 - C3 -4NIE 7.8 RORG_HUMAN
6 PsiBlast_PDB 81.3462%-168 - C3 -1NQ7 8.3 RORB_RAT
19 PsiBlast_PDB 80.9653%-173 - C3 -5APH 5.9 RORG_HUMAN
38 PsiBlast_CBE 80.6053%-174 - C3 -5G42 4.0 RORG_HUMAN
4 PsiBlast_PDB 80.3562%-167 - C3 -1K4W 2.3 RORB_RAT
18 PsiBlast_PDB 80.3452%-169 - C3 -3L0L 7.9 RORG_HUMAN
32 PsiBlast_CBE 80.3052%-170 - C3 -4WLB 6.3
24 PsiBlast_CBE 80.2753%-171 - C3 -4NIE 8.8
47 PsiBlast_CBE 80.1753%-175 - C3 -3L0J 8.1
28 PsiBlast_CBE 80.1652%-171 - C3 -5IZ0 3.5 ?
8 PsiBlast_PDB 80.1552%-179 - C3 -5EJV 2.6
25 PsiBlast_CBE 80.0852%-171 - C3 -4WPF 6.2 RORG_HUMAN
20 PsiBlast_PDB 80.0253%-171 - C3 -5APJ 4.2
33 PsiBlast_CBE 80.0152%-170 - C3 -3L0L 8.1
12 PsiBlast_PDB 79.9952%-172 - C3 -5IZ0 3.9
37 PsiBlast_CBE 79.9753%-171 - C3 -5G43 3.4 RORG_HUMAN
7 PsiBlast_PDB 79.8052%-168 - C3 -4S14 7.3
5 PsiBlast_PDB 79.7761%-162 - C3 -1N4H 6.5 RORB_RAT
22 PsiBlast_CBE 79.7552%-174 - C3 -5EJV 4.3 ?
27 PsiBlast_CBE 79.6052%-175 - C3 -5IZ0 3.4 ?
48 PsiBlast_CBE 79.4553%-175 - C3 -3KYT 7.8
45 PsiBlast_CBE 79.0153%-174 - C3 -4YPQ 8.9
46 PsiBlast_CBE 78.9853%-172 - C3 -4XT9 7.2 ?
110 HHSearch 78.8953%-173 * C3 *5APH 5.9 RORG_HUMAN
16 PsiBlast_PDB 78.5252%-167 - C3 -4WLB 6.4 RORG_HUMAN
11 PsiBlast_PDB 78.5152%-167 - C3 -4WPF 6.0 RORG_HUMAN
35 PsiBlast_CBE 78.4853%-174 - C3 -5G45 4.4
42 PsiBlast_CBE 78.3053%-167 - C3 -5C4T 10.4
62 PsiBlast_CBE 77.5952%-185 - C3 -5ETH 4.5 ?
41 PsiBlast_CBE 77.4853%-168 - C3 -5C4U 9.1
43 PsiBlast_CBE 77.3353%-170 - C3 -5C4S 10.6 RORG_HUMAN
63 PsiBlast_CBE 77.1652%-180 - C3 -5ETH 4.7
39 PsiBlast_CBE 77.0553%-161 - C3 -5APK 6.3 ?
60 PsiBlast_CBE 76.8852%-177 - C3 -5IXK 4.9 ?
61 PsiBlast_CBE 76.6352%-178 - C3 -5IXK 4.6
31 PsiBlast_CBE 76.5352%-169 - C3 -4WQP 8.0
55 PsiBlast_CBE 76.5052%-179 - C3 -4ZJW 5.7 RORG_HUMAN
14 PsiBlast_PDB 76.4152%-162 - C3 -4QM0 6.3 RORG_HUMAN
30 PsiBlast_CBE 76.3252%-171 - C3 -4NB6 4.6
17 PsiBlast_PDB 76.3152%-165 - C3 -4WQP 8.3 RORG_HUMAN
44 PsiBlast_CBE 76.2853%-166 - C3 -5C4O 11.2 ?
40 PsiBlast_CBE 76.2753%-174 - C3 -5APK 5.9
53 PsiBlast_CBE 76.1352%-177 - C3 -4ZOM 7.6
52 PsiBlast_CBE 75.9352%-177 - C3 -4ZOM 7.4 ?
13 PsiBlast_PDB 75.7052%-173 - C3 -4NB6 4.6 RORG_HUMAN
58 PsiBlast_CBE 75.5852%-159 - C3 -4ZJR 7.4 ?
29 PsiBlast_CBE 75.4652%-160 - C3 -4QM0 6.3
54 PsiBlast_CBE 75.2752%-168 - C3 -4ZOM 8.0 RORG_HUMAN
9 PsiBlast_PDB 74.4652%-172 - C3 -5AYG 8.3 RORG_HUMAN
56 PsiBlast_CBE 74.2952%-167 - C3 -4ZJR 6.1 ?
51 PsiBlast_CBE 74.1252%-165 - C3 -4ZOM 7.3 ?
50 PsiBlast_CBE 74.1153%-167 - C3 -3B0W 8.0 RORG_HUMAN
57 PsiBlast_CBE 74.0352%-160 - C3 -4ZJR 7.1 ?
49 PsiBlast_CBE 73.8453%-166 - C3 -3B0W 8.8
59 PsiBlast_CBE 73.4652%-169 - C3 -4ZJR 8.3
23 PsiBlast_CBE 73.1752%-169 - C3 -5AYG 7.0