@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR2B2_RXRb: (2016-11-25 )
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAVAGGEQQTPEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA

Atome Classification :

(73 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

K08_A_5(4N8R)
?
[Raw transfer]




K09_A_5(4N5G)
?
[Raw transfer]




K08_D_6(4N8R)
?
[Raw transfer]




2VZ_A_3(4PP3)
RXRA_HUMAN
[Raw transfer]




2W0_A_3(4PP5)
RXRA_HUMAN
[Raw transfer]




2VP_A_3(4POJ)
RXRA_HUMAN
[Raw transfer]




3T2_A_3(4RME)
RXRA_HUMAN
[Raw transfer]




3SV_A_3(4RMC)
RXRA_HUMAN
[Raw transfer]




3SW_A_3(4RMD)
RXRA_HUMAN
[Raw transfer]




3RB_A_3(4RFW)
RXRA_HUMAN
[Raw transfer]




29V_A_3(4M8E)
RXRA_HUMAN
[Raw transfer]




R4M_A_3(4M8H)
RXRA_HUMAN
[Raw transfer]




9RA_A_3(4K6I)
?
[Raw transfer]




1O8_A_3(4K4J)
?
[Raw transfer]




4XW_A_3(4ZSH)
RXRA_HUMAN
[Raw transfer]




REA_K_11(1XDK)
RXRA_MOUSE
[Raw transfer]




REA_I_9(1XDK)
RXRA_MOUSE
[Raw transfer]




REA_A_3(3OAP)
RXRA_HUMAN
[Raw transfer]




BM6_K_11(1MZN)
RXRA_HUMAN
[Raw transfer]




21P_A_5(2ZY0)
RXRA_HUMAN
[Raw transfer]




BM6_I_9(1MZN)
RXRA_HUMAN
[Raw transfer]




REA_D_4(1FBY)
RXRA_HUMAN
[Raw transfer]




21P_C_6(2ZY0)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1FM6)
RXRA_HUMAN
[Raw transfer]




BM6_J_10(1MZN)
RXRA_HUMAN
[Raw transfer]




HXA_E_5(1MV9)
RXRA_HUMAN
[Raw transfer]




BM6_E_5(1MVC)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1XIU)
RXR_BIOGL
[Raw transfer]




3TN_A_3(2P1T)
RXRA_HUMAN
[Raw transfer]




P26_A_3(2ZXZ)
RXRA_HUMAN
[Raw transfer]




REA_C_3(1FBY)
RXRA_HUMAN
[Raw transfer]




4TN_A_3(2P1U)
RXRA_HUMAN
[Raw transfer]




REA_J_10(1FM6)
RXRA_HUMAN
[Raw transfer]




5TN_A_3(2P1V)
RXRA_HUMAN
[Raw transfer]




BM6_L_12(1MZN)
RXRA_HUMAN
[Raw transfer]




REA_F_6(1FM9)
RXRA_HUMAN
[Raw transfer]




2VR_A_3(4POH)
RXRA_HUMAN
[Raw transfer]




9RA_A_5(3H0A)

[Raw transfer]




3TN_A_3(2P1T)
RXRA_HUMAN
[Raw transfer]




L79_E_5(1RDT)
RXRA_HUMAN
[Raw transfer]




5LO_A_3(5EC9)
?
[Raw transfer]




LG2_B_8(1H9U)
RXRB_HUMAN
[Raw transfer]




2E3_A_3(3FUG)
RXRA_HUMAN
[Raw transfer]




754_A_4(3A9E)
RXRA_MOUSE
[Raw transfer]




LG2_A_5(1H9U)
RXRB_HUMAN
[Raw transfer]




REA_E_5(1K74)
RXRA_HUMAN
[Raw transfer]




REA_K_11(1XIU)
RXR_BIOGL
[Raw transfer]




LG2_C_11(1H9U)
RXRB_HUMAN
[Raw transfer]




MEI_F_6(1UHL)

[Raw transfer]




OLA_D_4(1DKF)
RXRA_MOUSE
[Raw transfer]




REA_A_11(3E00)
RXRA_HUMAN
[Raw transfer]




REA_B_4(3UVV)
RXRA_HUMAN
[Raw transfer]




LG2_D_13(1H9U)

[Raw transfer]




2QO_A_3(4OC7)
RXRA_HUMAN
[Raw transfer]




F15_C_9(1XVP)
RXRA_HUMAN
[Raw transfer]




F15_A_11(1XV9)
RXRA_HUMAN
[Raw transfer]




F15_C_10(1XV9)
RXRA_HUMAN
[Raw transfer]




REA_A_11(3DZU)
RXRA_HUMAN
[Raw transfer]




REA_C_7(3FC6)
RXRA_HUMAN
[Raw transfer]




F15_A_10(1XVP)
RXRA_HUMAN
[Raw transfer]




T9T_A_3(3KWY)
RXRA_HUMAN
[Raw transfer]




TBY_A_3(3E94)
RXRA_HUMAN
[Raw transfer]




MLO_C_6(3R5M)
RXRA_HUMAN
[Raw transfer]




MLO_A_5(3R5M)
RXRA_HUMAN
[Raw transfer]




LX8_A_3(3PCU)
RXRA_HUMAN
[Raw transfer]




BGV_C_6(3OZJ)
RXRA_HUMAN
[Raw transfer]




REA_F_6(1G5Y)
RXRA_HUMAN
[Raw transfer]




REA_E_5(1G5Y)
RXRA_HUMAN
[Raw transfer]




K08_D_6(4N8R)
?
[Raw transfer]




K08_A_5(4N8R)
RXRA_HUMAN
[Raw transfer]




BGV_A_5(3OZJ)
RXRA_HUMAN
[Raw transfer]




K09_A_5(4N5G)
RXRA_HUMAN
[Raw transfer]




K09_D_6(4N5G)
?
[Raw transfer]




RHN_A_7(3R2A)
RXRA_HUMAN
[Raw transfer]




NEQ_U_4(4OZT)
?
[Raw transfer]




RHN_C_8(3R2A)
RXRA_HUMAN
[Raw transfer]




4 PsiBlast_PDB 80.85100%-146 - C4 -1UHL 5.8
82 PsiBlast_CBE 79.2288%-137 - C4 -4K4J 8.3 ?
69 PsiBlast_CBE 78.8788%-133 - C4 -4RME 9.4 RXRA_HUMAN
74 PsiBlast_CBE 78.7188%-139 - C4 -4RFW 8.1 RXRA_HUMAN
52 PsiBlast_CBE 78.7087%-145 - C4 -3OZJ 2.7 RXRA_HUMAN
76 PsiBlast_CBE 78.6988%-134 - C4 -4PP3 8.8 RXRA_HUMAN
31 PsiBlast_CBE 78.5686%-133 - C4 -4ZSH 8.1 RXRA_HUMAN
42 PsiBlast_CBE 78.5086%-134 - C4 -2ZY0 9.2 RXRA_HUMAN
80 PsiBlast_CBE 78.4988%-139 - C4 -4M8E 8.4 RXRA_HUMAN
70 PsiBlast_CBE 78.4788%-132 - C4 -4RMD 9.9 RXRA_HUMAN
77 PsiBlast_CBE 78.4488%-137 - C4 -4POJ 8.9 RXRA_HUMAN
32 PsiBlast_CBE 78.3986%-144 - C4 -3R5M 6.6 RXRA_HUMAN
44 PsiBlast_CBE 78.2886%-143 - C4 -2ZXZ 9.3 RXRA_HUMAN
12 PsiBlast_PDB 78.2586%-137 - C4 -4OC7 7.5 RXRA_HUMAN
75 PsiBlast_CBE 78.1888%-133 - C4 -4PP5 8.9 RXRA_HUMAN
78 PsiBlast_CBE 78.1588%-138 - C4 -4POH 8.2 RXRA_HUMAN
73 PsiBlast_CBE 78.0388%-130 - C4 -4RMC 8.2 RXRA_HUMAN
83 PsiBlast_CBE 77.8988%-132 - C4 -3OAP 7.7 RXRA_HUMAN
53 PsiBlast_CBE 77.8587%-134 - C4 -3OZJ 4.1 RXRA_HUMAN
81 PsiBlast_CBE 77.7688%-134 - C4 -4K6I 9.4 ?
33 PsiBlast_CBE 77.6286%-133 - C4 -3R5M 7.2 RXRA_HUMAN
43 PsiBlast_CBE 77.5886%-132 - C4 -2ZY0 9.1 RXRA_HUMAN
71 PsiBlast_CBE 77.4487%-134 - C4 -1XDK 7.6 RXRA_MOUSE
72 PsiBlast_CBE 77.4087%-133 - C4 -1XDK 7.7 RXRA_MOUSE
79 PsiBlast_CBE 77.3188%-135 - C4 -4M8H 8.2 RXRA_HUMAN
89 PsiBlast_CBE 77.0287%-138 - C4 -1DKF 7.3 RXRA_MOUSE
1 PsiBlast_PDB 76.3973%-126 - C4 -3DZU 7.2 RXRA_HUMAN
2 PsiBlast_PDB 76.2473%-126 - C4 -3E00 7.7 RXRA_HUMAN
65 PsiBlast_CBE 74.5688%-114 - C4 -1XVP 5.8 RXRA_HUMAN
67 PsiBlast_CBE 74.0488%-112 - C4 -1XV9 5.4 RXRA_HUMAN
19 PsiBlast_PDB 73.8186%-129 - C4 -1MZN 9.8 RXRA_HUMAN
61 PsiBlast_CBE 73.6787%-114 - C4 -1FM9 8.7 RXRA_HUMAN
68 PsiBlast_CBE 73.5388%-108 - C4 -1XV9 6.0 RXRA_HUMAN
18 PsiBlast_PDB 73.4786%-136 - C4 -1MVC 10.2 RXRA_HUMAN
58 PsiBlast_CBE 73.3387%-112 - C4 -1K74 7.8 RXRA_HUMAN
48 PsiBlast_CBE 73.1386%-129 - C4 -1MZN 9.9 RXRA_HUMAN
88 PsiBlast_CBE 73.1188%-144 - C4 -3PCU 4.7 RXRA_HUMAN
8 PsiBlast_PDB 73.02100%-161 - C4 -1H9U 9.8 RXRB_HUMAN
45 PsiBlast_CBE 72.9586%-140 - C4 -2P1V 10.3 RXRA_HUMAN
46 PsiBlast_CBE 72.9386%-148 - C4 -2P1U 10.1 RXRA_HUMAN
66 PsiBlast_CBE 72.8288%-106 - C4 -1XVP 5.4 RXRA_HUMAN
63 PsiBlast_CBE 72.7487%-118 - C4 -1FM6 8.1 RXRA_HUMAN
17 PsiBlast_PDB 72.7386%-133 - C4 -1MV9 8.8 RXRA_HUMAN
49 PsiBlast_CBE 72.5986%-135 - C4 -1MZN 9.8 RXRA_HUMAN
20 PsiBlast_PDB 72.5686%-144 - C4 -2P1T 9.7 RXRA_HUMAN
22 PsiBlast_CBE 72.35100%-155 - C4 -1H9U 9.6
91 PsiBlast_CBE 72.3485%-143 - C4 -5EC9 10.2 ?
47 PsiBlast_CBE 72.3386%-132 - C4 -1MZN 9.8 RXRA_HUMAN
41 PsiBlast_CBE 72.2186%-140 - C4 -3FUG 9.7 RXRA_HUMAN
24 PsiBlast_CBE 72.20100%-157 - C4 -1H9U 9.9 RXRB_HUMAN
13 PsiBlast_PDB 72.0086%-141 - C4 -3E94 5.8 RXRA_HUMAN
11 PsiBlast_PDB 71.9287%-139 - C4 -1RDT 9.8 RXRA_HUMAN
23 PsiBlast_CBE 71.84100%-157 - C4 -1H9U 9.5 RXRB_HUMAN
10 PsiBlast_PDB 71.8387%-132 - C4 -3UVV 7.9 RXRA_HUMAN
62 PsiBlast_CBE 71.3487%-115 - C4 -1FM6 8.5 RXRA_HUMAN
14 PsiBlast_PDB 71.2586%-144 - C4 -3KWY 7.5 RXRA_HUMAN
130 HHSearch 71.1993%-156 - C4 -2P1T 9.7 RXRA_HUMAN
50 PsiBlast_CBE 69.9587%-124 - C4 -1FBY 8.1 RXRA_HUMAN
59 PsiBlast_CBE 69.9087%-129 - C4 -1G5Y 6.3 RXRA_HUMAN
51 PsiBlast_CBE 69.7687%-120 - C4 -1FBY 8.0 RXRA_HUMAN
92 PsiBlast_CBE 68.5577%-115 - C4 -1XIU 8.3 RXR_BIOGL
60 PsiBlast_CBE 68.4287%-119 - C4 -1G5Y 6.6 RXRA_HUMAN
90 PsiBlast_CBE 67.8888%-114 - C4 -3H0A 8.2
26 PsiBlast_CBE 66.7686%-162 - C4 -4N8R 8.0 ?
15 PsiBlast_PDB 66.4786%-164 - C4 -4N5G 8.4 RXRA_HUMAN
95 PsiBlast_CBE 66.3076%-157 - C4 -4OZT 2.9 ?
64 PsiBlast_CBE 66.2987%-116 - C4 -3A9E 9.2 RXRA_MOUSE
25 PsiBlast_CBE 66.1387%-124 - C4 -3FC6 7.9 RXRA_HUMAN
16 PsiBlast_PDB 66.0286%-153 - C4 -4N8R 8.2 RXRA_HUMAN
93 PsiBlast_CBE 66.0177%-125 - C4 -1XIU 8.2 RXR_BIOGL
37 PsiBlast_CBE 65.4586%-119 - C4 -3R2A 3.7 RXRA_HUMAN
29 PsiBlast_CBE 65.1986%-158 - C4 -4N5G 8.2 ?
35 PsiBlast_CBE 63.4886%-130 - C4 -3R2A 3.8 RXRA_HUMAN