@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR2B3_RXRg: (2016-11-25 )
MYGNYSHFMKFPAGYGGSPGHTGSTSMSPSAALSTGKPMDSHPSYTDTPVSAPRTLSAVGTPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVSSSEDIKPLPGLPGIGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECATSGHEDMPVERILEAELAVEPKTESYGDMNMENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQIT

Atome Classification :

(73 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

K09_A_5(4N5G)
?
[Raw transfer]




K08_D_6(4N8R)
?
[Raw transfer]




K08_A_5(4N8R)
?
[Raw transfer]




3T2_A_3(4RME)
RXRA_HUMAN
[Raw transfer]




4TN_A_3(2P1U)
RXRA_HUMAN
[Raw transfer]




REA_K_11(1XDK)
RXRA_MOUSE
[Raw transfer]




5TN_A_3(2P1V)
RXRA_HUMAN
[Raw transfer]




HXA_E_5(1MV9)
RXRA_HUMAN
[Raw transfer]




BM6_I_9(1MZN)
RXRA_HUMAN
[Raw transfer]




3SW_A_3(4RMD)
RXRA_HUMAN
[Raw transfer]




R4M_A_3(4M8H)
RXRA_HUMAN
[Raw transfer]




9RA_A_3(4K6I)
?
[Raw transfer]




REA_I_9(1XDK)
RXRA_MOUSE
[Raw transfer]




BM6_K_11(1MZN)
RXRA_HUMAN
[Raw transfer]




29V_A_3(4M8E)
RXRA_HUMAN
[Raw transfer]




2VP_A_3(4POJ)
RXRA_HUMAN
[Raw transfer]




BM6_E_5(1MVC)
RXRA_HUMAN
[Raw transfer]




2W0_A_3(4PP5)
RXRA_HUMAN
[Raw transfer]




2VZ_A_3(4PP3)
RXRA_HUMAN
[Raw transfer]




3SV_A_3(4RMC)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1XIU)
RXR_BIOGL
[Raw transfer]




REA_J_10(1FM6)
RXRA_HUMAN
[Raw transfer]




5LO_A_3(5EC9)
?
[Raw transfer]




BM6_J_10(1MZN)
RXRA_HUMAN
[Raw transfer]




1O8_A_3(4K4J)
?
[Raw transfer]




3TN_A_3(2P1T)
RXRA_HUMAN
[Raw transfer]




2E3_A_3(3FUG)
RXRA_HUMAN
[Raw transfer]




3TN_A_3(2P1T)
RXRA_HUMAN
[Raw transfer]




REA_A_3(3OAP)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1FM6)
RXRA_HUMAN
[Raw transfer]




BM6_L_12(1MZN)
RXRA_HUMAN
[Raw transfer]




3RB_A_3(4RFW)
RXRA_HUMAN
[Raw transfer]




21P_A_5(2ZY0)
RXRA_HUMAN
[Raw transfer]




4XW_A_3(4ZSH)
RXRA_HUMAN
[Raw transfer]




REA_F_6(1FM9)
RXRA_HUMAN
[Raw transfer]




REA_D_4(1FBY)
RXRA_HUMAN
[Raw transfer]




9RA_A_5(3H0A)

[Raw transfer]




21P_C_6(2ZY0)
RXRA_HUMAN
[Raw transfer]




REA_C_3(1FBY)
RXRA_HUMAN
[Raw transfer]




L79_E_5(1RDT)
RXRA_HUMAN
[Raw transfer]




P26_A_3(2ZXZ)
RXRA_HUMAN
[Raw transfer]




LG2_A_5(1H9U)
RXRB_HUMAN
[Raw transfer]




2VR_A_3(4POH)
RXRA_HUMAN
[Raw transfer]




754_A_4(3A9E)
RXRA_MOUSE
[Raw transfer]




REA_K_11(1XIU)
RXR_BIOGL
[Raw transfer]




REA_E_5(1K74)
RXRA_HUMAN
[Raw transfer]




LG2_B_8(1H9U)
RXRB_HUMAN
[Raw transfer]




OLA_D_4(1DKF)
RXRA_MOUSE
[Raw transfer]




2QO_A_3(4OC7)
RXRA_HUMAN
[Raw transfer]




REA_A_11(3E00)
RXRA_HUMAN
[Raw transfer]




LG2_C_11(1H9U)
RXRB_HUMAN
[Raw transfer]




REA_B_4(3UVV)
RXRA_HUMAN
[Raw transfer]




LG2_D_13(1H9U)

[Raw transfer]




F15_C_9(1XVP)
RXRA_HUMAN
[Raw transfer]




F15_A_11(1XV9)
RXRA_HUMAN
[Raw transfer]




MEI_F_6(1UHL)

[Raw transfer]




F15_C_10(1XV9)
RXRA_HUMAN
[Raw transfer]




REA_A_11(3DZU)
RXRA_HUMAN
[Raw transfer]




REA_C_7(3FC6)
RXRA_HUMAN
[Raw transfer]




TBY_A_3(3E94)
RXRA_HUMAN
[Raw transfer]




F15_A_10(1XVP)
RXRA_HUMAN
[Raw transfer]




T9T_A_3(3KWY)
RXRA_HUMAN
[Raw transfer]




LX8_A_3(3PCU)
RXRA_HUMAN
[Raw transfer]




MLO_A_5(3R5M)
RXRA_HUMAN
[Raw transfer]




MLO_C_6(3R5M)
RXRA_HUMAN
[Raw transfer]




BGV_C_6(3OZJ)
RXRA_HUMAN
[Raw transfer]




REA_E_5(1G5Y)
RXRA_HUMAN
[Raw transfer]




REA_F_6(1G5Y)
RXRA_HUMAN
[Raw transfer]




K08_A_5(4N8R)
RXRA_HUMAN
[Raw transfer]




K08_D_6(4N8R)
?
[Raw transfer]




BGV_A_5(3OZJ)
RXRA_HUMAN
[Raw transfer]




K09_A_5(4N5G)
RXRA_HUMAN
[Raw transfer]




K09_D_6(4N5G)
?
[Raw transfer]




RHN_A_7(3R2A)
RXRA_HUMAN
[Raw transfer]




NEQ_U_4(4OZT)
?
[Raw transfer]




RHN_C_8(3R2A)
RXRA_HUMAN
[Raw transfer]




2 PsiBlast_PDB 78.3272%-128 - C3 -3E00 7.7 RXRA_HUMAN
1 PsiBlast_PDB 77.8072%-127 - C3 -3DZU 7.2 RXRA_HUMAN
14 PsiBlast_PDB 75.0586%-130 - C3 -1MZN 9.8 RXRA_HUMAN
40 PsiBlast_CBE 74.7786%-131 - C3 -1MZN 9.9 RXRA_HUMAN
59 PsiBlast_CBE 73.5986%-130 - C3 -1XDK 7.7 RXRA_MOUSE
43 PsiBlast_CBE 73.2086%-141 - C3 -3OZJ 2.7 RXRA_HUMAN
58 PsiBlast_CBE 73.0086%-130 - C3 -1XDK 7.6 RXRA_MOUSE
79 PsiBlast_CBE 72.7787%-133 - C3 -4K4J 8.3 ?
38 PsiBlast_CBE 72.7586%-131 - C3 -2ZY0 9.2 RXRA_HUMAN
29 PsiBlast_CBE 72.7486%-141 - C3 -3R5M 6.6 RXRA_HUMAN
74 PsiBlast_CBE 72.7287%-133 - C3 -4POJ 8.9 RXRA_HUMAN
18 PsiBlast_PDB 72.7086%-136 - C3 -3FUG 9.7 RXRA_HUMAN
16 PsiBlast_PDB 72.6886%-144 - C3 -2P1U 10.1 RXRA_HUMAN
20 PsiBlast_PDB 72.6086%-130 - C3 -2ZY0 9.1 RXRA_HUMAN
13 PsiBlast_PDB 72.6086%-133 - C3 -1MVC 10.2 RXRA_HUMAN
75 PsiBlast_CBE 72.5687%-134 - C3 -4POH 8.2 RXRA_HUMAN
81 PsiBlast_CBE 72.3887%-141 - C3 -3PCU 4.7 RXRA_HUMAN
41 PsiBlast_CBE 72.3886%-132 - C3 -1MZN 9.8 RXRA_HUMAN
17 PsiBlast_PDB 72.3786%-136 - C3 -2P1V 10.3 RXRA_HUMAN
15 PsiBlast_PDB 72.3186%-139 - C3 -2P1T 9.7 RXRA_HUMAN
64 PsiBlast_CBE 72.2387%-130 - C3 -4RME 9.4 RXRA_HUMAN
80 PsiBlast_CBE 72.1687%-129 - C3 -3OAP 7.7 RXRA_HUMAN
77 PsiBlast_CBE 72.1687%-135 - C3 -4M8E 8.4 RXRA_HUMAN
12 PsiBlast_PDB 72.1586%-130 - C3 -1MV9 8.8 RXRA_HUMAN
28 PsiBlast_CBE 72.1486%-130 - C3 -4ZSH 8.1 RXRA_HUMAN
73 PsiBlast_CBE 72.1387%-129 - C3 -4PP3 8.8 RXRA_HUMAN
6 PsiBlast_PDB 72.1386%-134 - C3 -4OC7 7.5 RXRA_HUMAN
30 PsiBlast_CBE 72.1286%-129 - C3 -3R5M 7.2 RXRA_HUMAN
78 PsiBlast_CBE 72.0687%-131 - C3 -4K6I 9.4 ?
76 PsiBlast_CBE 72.0187%-131 - C3 -4M8H 8.2 RXRA_HUMAN
71 PsiBlast_CBE 72.0087%-134 - C3 -4RFW 8.1 RXRA_HUMAN
42 PsiBlast_CBE 71.9786%-129 - C3 -3UVV 7.9 RXRA_HUMAN
65 PsiBlast_CBE 71.9087%-129 - C3 -4RMD 9.9 RXRA_HUMAN
8 PsiBlast_PDB 71.8686%-138 - C3 -3E94 5.8 RXRA_HUMAN
72 PsiBlast_CBE 71.8387%-129 - C3 -4PP5 8.9 RXRA_HUMAN
44 PsiBlast_CBE 71.8386%-133 - C3 -3OZJ 4.1 RXRA_HUMAN
39 PsiBlast_CBE 71.8086%-129 - C3 -1MZN 9.8 RXRA_HUMAN
85 PsiBlast_CBE 71.7885%-139 - C3 -5EC9 10.2 ?
19 PsiBlast_PDB 71.7186%-139 - C3 -2ZXZ 9.3 RXRA_HUMAN
56 PsiBlast_CBE 71.6186%-135 - C3 -1RDT 9.8 RXRA_HUMAN
82 PsiBlast_CBE 71.5286%-135 - C3 -1DKF 7.4 RXRA_MOUSE
70 PsiBlast_CBE 71.2687%-125 - C3 -4RMC 8.2 RXRA_HUMAN
9 PsiBlast_PDB 71.2386%-140 - C3 -3KWY 7.5 RXRA_HUMAN
86 PsiBlast_CBE 70.8280%-115 - C3 -1XIU 8.3 RXR_BIOGL
27 PsiBlast_CBE 70.2286%-120 - C3 -1FBY 8.1 RXRA_HUMAN
128 HHSearch 70.0190%-156 - C3 -2P1T 9.6 RXRA_HUMAN
91 PsiBlast_CBE 69.8283%-155 - C3 -1H9U 9.8 RXRB_HUMAN
7 PsiBlast_PDB 69.6486%-117 - C3 -1FBY 8.0 RXRA_HUMAN
89 PsiBlast_CBE 69.6183%-151 - C3 -1H9U 9.5 RXRB_HUMAN
90 PsiBlast_CBE 69.4083%-151 - C3 -1H9U 9.9 RXRB_HUMAN
88 PsiBlast_CBE 69.3283%-149 - C3 -1H9U 9.6
87 PsiBlast_CBE 69.2780%-123 - C3 -1XIU 8.2 RXR_BIOGL
52 PsiBlast_CBE 68.6686% -33 - C3 -1FM9 8.7 RXRA_HUMAN
60 PsiBlast_CBE 68.0786% -19 - C3 -1XVP 5.8 RXRA_HUMAN
57 PsiBlast_CBE 67.9385%-113 - C3 -3A9E 9.2 RXRA_MOUSE
54 PsiBlast_CBE 67.9386% -30 - C3 -1FM6 8.1 RXRA_HUMAN
49 PsiBlast_CBE 67.7486% -27 - C3 -1K74 7.8 RXRA_HUMAN
83 PsiBlast_CBE 67.5888%-112 - C3 -3H0A 8.2
63 PsiBlast_CBE 67.5286% -18 - C3 -1XV9 6.0 RXRA_HUMAN
22 PsiBlast_CBE 67.1686%-158 - C3 -4N8R 8.0 ?
62 PsiBlast_CBE 67.1086% -14 - C3 -1XV9 5.4 RXRA_HUMAN
34 PsiBlast_CBE 67.0186%-115 - C3 -3R2A 3.7 RXRA_HUMAN
61 PsiBlast_CBE 66.5386% -15 - C3 -1XVP 5.4 RXRA_HUMAN
10 PsiBlast_PDB 66.4286%-158 - C3 -4N5G 8.4 RXRA_HUMAN
93 PsiBlast_CBE 66.2574%-153 - C3 -4OZT 3.1 ?
55 PsiBlast_CBE 66.1586%-119 - C3 -3FC6 7.9 RXRA_HUMAN
25 PsiBlast_CBE 66.0386%-154 - C3 -4N5G 8.1 ?
53 PsiBlast_CBE 65.9586% -22 - C3 -1FM6 8.5 RXRA_HUMAN
11 PsiBlast_PDB 65.9086%-148 - C3 -4N8R 8.2 RXRA_HUMAN
32 PsiBlast_CBE 65.8686%-124 - C3 -3R2A 3.8 RXRA_HUMAN
50 PsiBlast_CBE 62.4086% -8 - C3 -1G5Y 6.3 RXRA_HUMAN
84 PsiBlast_CBE 61.1581% 19 - C3 -1UHL 5.8
51 PsiBlast_CBE 60.4986% -5 - C3 -1G5Y 6.6 RXRA_HUMAN