@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR3B2_ERRb: (2016-04-08 )
MSSDDRHLGSSCGSFIKTEPSSPSSGIDALSHHSPSGSSDASGGFGLALGTHANGLDSPPMFAGAGLGGTPCRKSYEDCASGIMEDSAIKCEYMLNAIPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLVAEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSSLSLGDQMSLLQSAWMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELYRAILQLVRRYKKLKVEKEEFVTLKALALANSDSMYIEDLEAVQKLQDLLHEALQDYELSQRHEEPWRTGKLLLTLPLLRQTAAKAVQHFYSVKLQGKVPMHKLFLEMLEAKAWARADSLQEWRPLEQVPSPLHRATKRQHVHFLTPLPPPPSVAWVGTAQAGYHLEVFLPQRAGWPRAA

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OHT_A_2(2GPU)

[Raw transfer]




1OH_A_2(2ZAS)
ERR3_HUMAN
[Raw transfer]




OHT_C_3(1VJB)
ERR3_HUMAN
[Raw transfer]




OHT_D_4(1VJB)
ERR3_HUMAN
[Raw transfer]




TXF_C_8(2EWP)
ERR3_HUMAN
[Raw transfer]




TXF_A_6(2EWP)
ERR3_HUMAN
[Raw transfer]




TXF_E_10(2EWP)

[Raw transfer]




OHT_A_2(2P7Z)
ERR3_HUMAN
[Raw transfer]




2OH_A_3(2P7G)
ERR3_HUMAN
[Raw transfer]




TXF_D_9(2EWP)
ERR3_HUMAN
[Raw transfer]




2OH_A_2(2E2R)
ERR3_HUMAN
[Raw transfer]




TXF_B_7(2EWP)
ERR3_HUMAN
[Raw transfer]




DES_H_8(1S9P)

[Raw transfer]




2OH_A_2(2E2R)
ERR3_HUMAN
[Raw transfer]




43M_A_2(2P7A)
ERR3_HUMAN
[Raw transfer]




DES_E_5(1S9P)
ERR3_MOUSE
[Raw transfer]




DES_F_6(1S9P)
ERR3_MOUSE
[Raw transfer]




1BA_A_5(2GPP)
ERR3_HUMAN
[Raw transfer]




DES_G_7(1S9P)
ERR3_MOUSE
[Raw transfer]




5FB_A_2(3K6P)
ERR1_HUMAN
[Raw transfer]




CHD_E_5(1S9Q)
ERR3_MOUSE
[Raw transfer]




13 PsiBlast_PDB 93.5279%-131 - C5 -2P7G 5.6 ERR3_HUMAN
2 PsiBlast_PDB 92.5976%-131 - C5 -2ZAS 6.2 ERR3_HUMAN
3 PsiBlast_PDB 92.1776%-130 - C5 -2ZBS - ERR3_HUMAN -
6 PsiBlast_PDB 91.6879%-127 - C5 -2GPO - ERR3_HUMAN -
12 PsiBlast_PDB 91.6579%-131 - C5 -2P7A 4.1 ERR3_HUMAN
11 PsiBlast_PDB 91.2679%-133 - C5 -1TFC - ERR3_HUMAN -
1 PsiBlast_PDB 91.2476%-130 - C5 -2E2R 5.8 ERR3_HUMAN
34 PsiBlast_CBE 91.0978%-128 - C5 -2EWP 7.2 ERR3_HUMAN
17 PsiBlast_PDB 90.9978%-132 - C5 -2EWP 6.7 ERR3_HUMAN
5 PsiBlast_PDB 90.6579%-128 - C5 -2GP7 - ERR3_HUMAN -
8 PsiBlast_PDB 90.6279%-132 - C5 -2GPU 8.7
36 PsiBlast_CBE 90.6178%-131 - C5 -2EWP 7.6 ERR3_HUMAN
7 PsiBlast_PDB 90.2079%-129 - C5 -2GPP 7.0 ERR3_HUMAN
4 PsiBlast_PDB 90.0679%-132 - C5 -1KV6 - ERR3_HUMAN -
42 HHSearch 89.9379%-134 - C5 -2E2R 5.8 ERR3_HUMAN
35 PsiBlast_CBE 89.4578%-129 - C5 -2EWP 7.8 ERR3_HUMAN
33 PsiBlast_CBE 88.6878%-136 - C5 -2EWP 7.1
30 PsiBlast_CBE 88.6678%-125 - C5 -1S9P 6.8
9 PsiBlast_PDB 88.5679%-125 - C5 -2GPV - ERR3_HUMAN -
32 PsiBlast_CBE 88.5478%-123 - C5 -1S9P 6.4 ERR3_MOUSE
15 PsiBlast_PDB 86.5479%-126 - C5 -1S9Q 4.4 ERR3_MOUSE
14 PsiBlast_PDB 86.4979%-121 - C5 -2P7Z 7.6 ERR3_HUMAN
16 PsiBlast_PDB 86.1378%-123 - C5 -1S9P 6.6 ERR3_MOUSE
31 PsiBlast_CBE 85.7578%-122 - C5 -1S9P 6.5 ERR3_MOUSE
28 PsiBlast_CBE 84.5879%-122 - C5 -1VJB 7.2 ERR3_HUMAN
10 PsiBlast_PDB 83.6079%-124 - C5 -1VJB 7.7 ERR3_HUMAN