@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : M_NR1C2_PPARD: (2016-04-07 )
MEQPQEETPEAREEEKEEVAMGDGAPELNGGPEHTLPSSSCADLSQNSSPSSLLDQLQMGCDGASGGSLNMECRVCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCDRICKIQKKNRNKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTASEGCQHNPQLADLKAFSKHIYNAYLKNFNMTKKKARSILTGKSSHNAPFVIHDIETLWQAEKGLVWKQLVNGLPPYNEISVHVFYRCQSTTVETVRELTEFAKNIPNFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTHEFLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPQVEAIQDTILRALEFHLQVNHPDSQYLFPKLLQKMADLRQLVTEHAQMMQWLKKTESETLLHPLLQEIYKDMY

Atome Classification :

(138 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IL2_B_4(3SP9)
PPARD_HUMAN
[Raw transfer]




IL2_A_3(3SP9)
PPARD_HUMAN
[Raw transfer]




3EQ_A_3(3PEQ)
PPARD_HUMAN
[Raw transfer]




L41_B_4(3D5F)
PPARD_HUMAN
[Raw transfer]




S44_A_2(2ZNN)
PPARA_HUMAN
[Raw transfer]




VCA_A_7(2B50)
PPARD_HUMAN
[Raw transfer]




3EQ_B_10(3PEQ)
PPARD_HUMAN
[Raw transfer]




L41_A_3(3D5F)
PPARD_HUMAN
[Raw transfer]




VCA_E_5(2AWH)
PPARD_HUMAN
[Raw transfer]




VCA_F_6(2BAW)
PPARD_HUMAN
[Raw transfer]




IL2_A_3(3SP6)
PPARA_HUMAN
[Raw transfer]




VCA_B_8(2B50)
PPARD_HUMAN
[Raw transfer]




VCA_F_6(2AWH)
PPARD_HUMAN
[Raw transfer]




735_C_3(2P54)
PPARA_HUMAN
[Raw transfer]




401_B_6(2ZNQ)
PPARD_HUMAN
[Raw transfer]




24L_A_3(3V9Y)
PPARG_HUMAN
[Raw transfer]




K55_A_4(2ZNP)
PPARD_HUMAN
[Raw transfer]




Y1N_A_2(4CI4)
PPARA_HUMAN
[Raw transfer]




DRD_A_3(2HWR)
PPARG_HUMAN
[Raw transfer]




331_O_15(1Y0S)
PPARD_HUMAN
[Raw transfer]




331_N_14(1Y0S)
PPARD_HUMAN
[Raw transfer]




3EA_D_4(2ATH)
PPARG_HUMAN
[Raw transfer]




401_A_4(2ZNQ)
PPARD_HUMAN
[Raw transfer]




13M_A_2(3VI8)
PPARA_HUMAN
[Raw transfer]




13M_A_2(3VI8)
PPARA_HUMAN
[Raw transfer]




GW0_A_2(3TKM)
PPARD_HUMAN
[Raw transfer]




K55_B_6(2ZNP)
PPARD_HUMAN
[Raw transfer]




UNT_A_3(3IA6)
PPARG_HUMAN
[Raw transfer]




RO7_A_3(3G9E)
PPARG_HUMAN
[Raw transfer]




EK1_A_3(3VSO)
PPARG_HUMAN
[Raw transfer]




208_A_3(2GTK)
PPARG_HUMAN
[Raw transfer]




MMB_A_5(2NPA)
PPARA_HUMAN
[Raw transfer]




DRJ_C_3(2I4J)
PPARG_HUMAN
[Raw transfer]




3OZ_A_2(3OZ0)
PPARD_HUMAN
[Raw transfer]




ET1_B_7(3ET2)
PPARD_HUMAN
[Raw transfer]




AZ2_C_3(1I7I)
PPARG_HUMAN
[Raw transfer]




4HD_A_3(2VV1)
PPARG_HUMAN
[Raw transfer]




3EA_C_3(2ATH)
PPARG_HUMAN
[Raw transfer]




MMB_C_6(2NPA)
PPARA_HUMAN
[Raw transfer]




CTM_A_3(3FEJ)
PPARG_HUMAN
[Raw transfer]




9HO_A_3(2VSR)
PPARG_HUMAN
[Raw transfer]




WLM_A_3(2XYJ)
PPARD_HUMAN
[Raw transfer]




M7S_A_3(3AN3)
PPARG_HUMAN
[Raw transfer]




Y1N_A_3(4CI5)
PPARG_HUMAN
[Raw transfer]




5OX_A_3(3X1H)
PPARG_HUMAN
[Raw transfer]




L92_A_3(2Q8S)
PPARG_HUMAN
[Raw transfer]




DRH_A_3(2I4Z)
PPARG_HUMAN
[Raw transfer]




CTM_A_3(3FEI)
PPARA_HUMAN
[Raw transfer]




WLM_B_6(2XYJ)
PPARD_HUMAN
[Raw transfer]




M7R_A_3(3AN4)
PPARG_HUMAN
[Raw transfer]




DY6_B_5(3DY6)
PPARD_HUMAN
[Raw transfer]




ET1_A_3(3ET2)
PPARD_HUMAN
[Raw transfer]




538_D_6(3KMG)
PPARG_HUMAN
[Raw transfer]




ET1_A_5(3ET1)
PPARA_HUMAN
[Raw transfer]




DY6_A_4(3DY6)
PPARD_HUMAN
[Raw transfer]




ET1_B_6(3ET1)
PPARA_HUMAN
[Raw transfer]




RO7_A_3(3G8I)
PPARA_HUMAN
[Raw transfer]




LRG_A_3(3B3K)
PPARG_HUMAN
[Raw transfer]




C01_C_3(1ZEO)
PPARG_HUMAN
[Raw transfer]




TLS_A_3(3VN2)
PPARG_HUMAN
[Raw transfer]




08S_A_3(2XYW)
PPARD_HUMAN
[Raw transfer]




DRY_A_3(2HWQ)
PPARG_HUMAN
[Raw transfer]




240_A_3(2Q59)
PPARG_HUMAN
[Raw transfer]




EK8_A_3(3VSP)
PPARG_HUMAN
[Raw transfer]




Z00_A_3(2XYX)
PPARD_HUMAN
[Raw transfer]




F22_A_3(2VV0)
PPARG_HUMAN
[Raw transfer]




240_B_4(2Q59)
PPARG_HUMAN
[Raw transfer]




08S_B_5(2XYW)
PPARD_HUMAN
[Raw transfer]




J35_A_3(3VJH)
PPARG_HUMAN
[Raw transfer]




14R_X_3(4HEE)
PPARG_HUMAN
[Raw transfer]




GRR_A_3(3CDS)
PPARG_HUMAN
[Raw transfer]




Z00_B_5(2XYX)
PPARD_HUMAN
[Raw transfer]




538_A_5(3KMG)
PPARG_HUMAN
[Raw transfer]




1FA_A_3(2Q5G)
PPARD_HUMAN
[Raw transfer]




LRG_A_2(4L96)
PPARG_HUMAN
[Raw transfer]




4R8_A_3(2VV3)
PPARG_HUMAN
[Raw transfer]




IMN_A_4(3ADS)
PPARG_HUMAN
[Raw transfer]




RRG_A_4(4E4K)
PPARG_HUMAN
[Raw transfer]




486_A_3(3QT0)
PPARG_HUMAN
[Raw transfer]




GW4_A_3(2POB)
PPARG_HUMAN
[Raw transfer]




MYI_A_4(3ADU)
PPARG_HUMAN
[Raw transfer]




3JX_A_3(4R2U)
PPARG_HUMAN
[Raw transfer]




17L_A_3(3V9T)
PPARG_HUMAN
[Raw transfer]




YRG_A_3(3CDP)
PPARG_HUMAN
[Raw transfer]




DKD_A_3(3HO0)
PPARG_HUMAN
[Raw transfer]




0W3_A_3(4FGY)
PPARG_HUMAN
[Raw transfer]




NSI_D_4(2HFP)
PPARG_HUMAN
[Raw transfer]




OCX_A_3(2ZK3)
PPARG_HUMAN
[Raw transfer]




PTG_A_3(2ZVT)
PPARG_HUMAN
[Raw transfer]




LNA_B_7(3CWD)
PPARG_HUMAN
[Raw transfer]




LNA_A_5(3CWD)
PPARG_HUMAN
[Raw transfer]




21L_A_3(3V9V)
PPARG_HUMAN
[Raw transfer]




HIG_A_3(3R8A)
PPARG_HUMAN
[Raw transfer]




EPA_B_4(3GWX)
PPARD_HUMAN
[Raw transfer]




RO0_C_3(2FVJ)
PPARG_HUMAN
[Raw transfer]




SF2_B_4(2Q6R)
PPARG_HUMAN
[Raw transfer]




KRC_A_3(3B1M)
PPARG_HUMAN
[Raw transfer]




1FA_B_4(2Q5G)
PPARD_HUMAN
[Raw transfer]




T9T_A_3(3WJ5)
PPARG_HUMAN
[Raw transfer]




243_B_4(2VST)
PPARG_HUMAN
[Raw transfer]




T9T_B_4(3WJ5)
PPARG_HUMAN
[Raw transfer]




241_A_3(2Q5P)
PPARG_HUMAN
[Raw transfer]




YFD_A_3(4A4V)
PPARG_HUMAN
[Raw transfer]




471_K_11(1KKQ)
PPARA_HUMAN
[Raw transfer]




SF1_A_4(2Q61)
PPARG_HUMAN
[Raw transfer]




4HD_B_4(2VV1)
PPARG_HUMAN
[Raw transfer]




243_A_3(2VST)
PPARG_HUMAN
[Raw transfer]




471_L_12(1KKQ)
PPARA_HUMAN
[Raw transfer]




SF2_A_3(2Q6R)
PPARG_HUMAN
[Raw transfer]




YFE_B_4(2YFE)
PPARG_HUMAN
[Raw transfer]




PTG_A_3(2ZK1)
PPARG_HUMAN
[Raw transfer]




SP3_C_3(2G0H)
PPARG_HUMAN
[Raw transfer]




471_J_10(1KKQ)
PPARA_HUMAN
[Raw transfer]




MYI_B_7(3ADU)
PPARG_HUMAN
[Raw transfer]




SP3_D_4(2G0H)
PPARG_HUMAN
[Raw transfer]




471_I_9(1KKQ)
PPARA_HUMAN
[Raw transfer]




C08_A_3(2ZK6)
PPARG_HUMAN
[Raw transfer]




WY1_B_8(4BCR)
PPARA_HUMAN
[Raw transfer]




IMN_B_5(3ADX)
PPARG_HUMAN
[Raw transfer]




WY1_A_5(4BCR)
PPARA_HUMAN
[Raw transfer]




YFB_B_4(4A4W)
PPARG_HUMAN
[Raw transfer]




PTG_B_4(2ZK1)
PPARG_HUMAN
[Raw transfer]




MYI_A_3(3ADW)
PPARG_HUMAN
[Raw transfer]




GW9_D_12(3E00)
PPARG_HUMAN
[Raw transfer]




OCR_B_4(2ZK4)
PPARG_HUMAN
[Raw transfer]




F22_B_4(2VV0)
PPARG_HUMAN
[Raw transfer]




PTG_A_4(2ZK2)
PPARG_HUMAN
[Raw transfer]




YFD_B_4(4A4V)
PPARG_HUMAN
[Raw transfer]




CTI_A_3(4Y29)
?
[Raw transfer]




Z27_B_5(3K8S)
PPARG_HUMAN
[Raw transfer]




HID_A_4(3ADT)
PPARG_HUMAN
[Raw transfer]




OCX_B_4(2ZK3)
PPARG_HUMAN
[Raw transfer]




XDI_A_3(3OSW)
PPARG_HUMAN
[Raw transfer]




SRO_A_4(3ADV)
PPARG_HUMAN
[Raw transfer]




KNA_A_4(3SZ1)
PPARG_HUMAN
[Raw transfer]




5HE_B_5(2VV2)
PPARG_HUMAN
[Raw transfer]




PGO_B_8(3PO9)
PPARG_HUMAN
[Raw transfer]




37 PsiBlast_CBE 90.9064%-127 - C4 -3E00 4.4 PPARG_HUMAN
15 PsiBlast_PDB 90.1294%-143 - C4 -3TKM 9.1 PPARD_HUMAN
17 PsiBlast_PDB 89.7494%-142 - C4 -3SP9 8.6 PPARD_HUMAN
34 PsiBlast_CBE 89.5094%-142 - C4 -2B50 7.7 PPARD_HUMAN
30 PsiBlast_CBE 89.2994%-146 - C4 -3PEQ 10.6 PPARD_HUMAN
40 PsiBlast_CBE 89.0594%-145 - C4 -2BAW 6.7 PPARD_HUMAN
16 PsiBlast_PDB 89.0594%-140 - C4 -2B50 7.3 PPARD_HUMAN
32 PsiBlast_CBE 88.9394%-147 - C4 -3DY6 8.5 PPARD_HUMAN
13 PsiBlast_PDB 88.9294%-149 - C4 -3DY6 8.1 PPARD_HUMAN
14 PsiBlast_PDB 88.9194%-144 - C4 -3PEQ 10.4 PPARD_HUMAN
10 PsiBlast_PDB 88.8294%-142 - C4 -1Y0S 8.6 PPARD_HUMAN
36 PsiBlast_CBE 88.7694%-145 - C4 -2AWH 6.7 PPARD_HUMAN
35 PsiBlast_CBE 88.7594%-140 - C4 -3SP9 8.1 PPARD_HUMAN
38 PsiBlast_CBE 88.6994%-142 - C4 -3D5F 8.8 PPARD_HUMAN
1 PsiBlast_PDB 88.6293%-141 - C4 -3ET2 7.4 PPARD_HUMAN
9 PsiBlast_PDB 88.5894%-141 - C4 -2ZNQ 8.7 PPARD_HUMAN
27 PsiBlast_CBE 88.3294%-139 - C4 -2ZNQ 8.9 PPARD_HUMAN
19 PsiBlast_PDB 88.1693%-136 - C4 -3GZ9 - PPARD_HUMAN -
28 PsiBlast_CBE 88.1494%-139 - C4 -2ZNP 9.9 PPARD_HUMAN
18 PsiBlast_PDB 88.1194%-142 - C4 -2AWH 7.1 PPARD_HUMAN
39 PsiBlast_CBE 88.0694%-142 - C4 -3D5F 9.2 PPARD_HUMAN
26 PsiBlast_CBE 87.9794%-140 - C4 -2XYJ 8.4 PPARD_HUMAN
21 PsiBlast_CBE 87.7693%-138 - C4 -3ET2 6.8 PPARD_HUMAN
5 PsiBlast_PDB 87.6894%-133 - C4 -2XYJ 8.4 PPARD_HUMAN
29 PsiBlast_CBE 87.4194%-143 - C4 -1Y0S 8.9 PPARD_HUMAN
24 PsiBlast_CBE 87.1994%-135 - C4 -2XYX 8.8 PPARD_HUMAN
8 PsiBlast_PDB 87.0594%-139 - C4 -2ZNP 9.4 PPARD_HUMAN
6 PsiBlast_PDB 87.0294%-140 - C4 -2XYW 9.6 PPARD_HUMAN
7 PsiBlast_PDB 87.0194%-141 - C4 -2XYX 8.7 PPARD_HUMAN
3 PsiBlast_PDB 87.0093%-142 - C4 -3OZ0 10.3 PPARD_HUMAN
31 PsiBlast_CBE 86.9394%-133 - C4 -3GWX 5.6 PPARD_HUMAN
25 PsiBlast_CBE 86.5594%-139 - C4 -2XYW 9.8 PPARD_HUMAN
23 PsiBlast_CBE 82.9293%-146 - C4 -2Q5G 11.4 PPARD_HUMAN
64 PsiBlast_CBE 81.5569%-140 - C4 -3FEI 7.8 PPARA_HUMAN
62 PsiBlast_CBE 81.5569%-136 - C4 -2NPA 5.5 PPARA_HUMAN
52 PsiBlast_CBE 81.3868%-132 - C4 -3SP6 7.3 PPARA_HUMAN
4 PsiBlast_PDB 81.3793%-132 - C4 -2Q5G 11.2 PPARD_HUMAN
49 PsiBlast_CBE 81.1568%-143 - C4 -4CI4 6.9 PPARA_HUMAN
50 PsiBlast_CBE 80.6268%-137 - C4 -4BCR 5.0 PPARA_HUMAN
54 PsiBlast_CBE 80.5769%-132 - C4 -3ET1 6.5 PPARA_HUMAN
65 PsiBlast_CBE 80.3869%-132 - C4 -2P54 7.3 PPARA_HUMAN
247 HHSearch 80.3369%-134 - C4 -3VI8 7.8 PPARA_HUMAN
53 PsiBlast_CBE 80.2869%-126 - C4 -3ET1 6.0 PPARA_HUMAN
61 PsiBlast_CBE 80.1769%-132 - C4 -2ZNN 9.8 PPARA_HUMAN
60 PsiBlast_CBE 80.1169%-133 - C4 -3VI8 7.8 PPARA_HUMAN
59 PsiBlast_CBE 79.9069%-136 - C4 -3G8I 8.7 PPARA_HUMAN
182 PsiBlast_CBE 79.2160%-138 - C4 -3B1M 7.3 PPARG_HUMAN
186 PsiBlast_CBE 79.1660%-135 - C4 -4CI5 7.0 PPARG_HUMAN
51 PsiBlast_CBE 79.1468%-132 - C4 -4BCR 5.7 PPARA_HUMAN
179 PsiBlast_CBE 79.0660%-138 - C4 -3V9V 6.2 PPARG_HUMAN
143 PsiBlast_CBE 78.9459%-133 - C4 -3VJH 5.2 PPARG_HUMAN
77 PsiBlast_CBE 78.8560%-135 - C4 -4A4V 4.9 PPARG_HUMAN
223 PsiBlast_CBE 78.6960%-138 - C4 -2GTK 6.7 PPARG_HUMAN
63 PsiBlast_CBE 78.6269%-128 - C4 -2NPA 7.6 PPARA_HUMAN
137 PsiBlast_CBE 78.6159%-140 - C4 -3OSW 6.2 PPARG_HUMAN
69 PsiBlast_CBE 78.6059%-137 - C4 -3VN2 9.0 PPARG_HUMAN
194 PsiBlast_CBE 78.5760%-141 - C4 -2POB 7.2 PPARG_HUMAN
178 PsiBlast_CBE 78.5360%-136 - C4 -3V9Y 8.1 PPARG_HUMAN
89 PsiBlast_CBE 78.4760%-135 - C4 -3ADS 7.1 PPARG_HUMAN
126 PsiBlast_CBE 78.4560%-136 - C4 -2VSR 5.1 PPARG_HUMAN
217 PsiBlast_CBE 78.4060%-138 - C4 -3G9E 6.0 PPARG_HUMAN
187 PsiBlast_CBE 78.4060%-136 - C4 -3KMG 7.0 PPARG_HUMAN
151 PsiBlast_CBE 78.3359%-133 - C4 -3AN3 5.1 PPARG_HUMAN
82 PsiBlast_CBE 78.2060%-136 - C4 -3ADW 3.8 PPARG_HUMAN
107 PsiBlast_CBE 78.1960%-137 - C4 -2Q61 7.1 PPARG_HUMAN
218 PsiBlast_CBE 78.1760%-136 - C4 -3FEJ 7.1 PPARG_HUMAN
141 PsiBlast_CBE 78.1459%-135 - C4 -3VSP 6.5 PPARG_HUMAN
221 PsiBlast_CBE 78.1060%-138 - C4 -2HWR 8.4 PPARG_HUMAN
86 PsiBlast_CBE 78.1060%-135 - C4 -3ADU 4.1 PPARG_HUMAN
97 PsiBlast_CBE 78.0960%-138 - C4 -1I7I 4.1 PPARG_HUMAN
132 PsiBlast_CBE 78.0360%-136 - C4 -3SZ1 3.0 PPARG_HUMAN
120 PsiBlast_CBE 77.9560%-135 - C4 -2VV1 5.8 PPARG_HUMAN
142 PsiBlast_CBE 77.8959%-134 - C4 -3VSO 7.9 PPARG_HUMAN
201 PsiBlast_CBE 77.8660%-140 - C4 -4HEE 8.8 PPARG_HUMAN
100 PsiBlast_CBE 77.8660%-136 - C4 -4R2U 6.6 PPARG_HUMAN
231 PsiBlast_CBE 77.8460%-133 - C4 -3CWD 4.6 PPARG_HUMAN
162 PsiBlast_CBE 77.8259%-133 - C4 -2ZK2 4.2 PPARG_HUMAN
87 PsiBlast_CBE 77.8060%-136 - C4 -3ADT 3.6 PPARG_HUMAN
124 PsiBlast_CBE 77.7960%-136 - C4 -2VST 4.8 PPARG_HUMAN
150 PsiBlast_CBE 77.7859%-135 - C4 -3AN4 8.4 PPARG_HUMAN