@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : M_NR3C1_GCR: (2016-04-07 )
MDSKESLAPPGRDEVPSSLLGRGRGSVMDLYKTLRGGATVKVSASSPSVAAASQADSKQQRILLDFSKGSASNAQQQQQQQQPQPDLSKAVSLSMGLYMGETETKVMGNDLGYPQQGQLGLSSGETDFRLLEESIANLNRSTSRPENPKSSTPAAGCATPTEKEFPQTHSDPSSEQQNRKSQPGTNGGSVKLYTTDQSTFDILQDLEFSAGSPGKETNESPWRSDLLIDENLLSPLAGEDDPFLLEGDVNEDCKPLILPDTKPKIQDTGDTILSSPSSVALPQVKTEKDDFIELCTPGVIKQEKLGPVYCQASFSGTNIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPVFNVIPPIPVGSENWNRCQGSGEDNLTSLGAMNFAGRSVFSNGYSSPGMRPDVSSPPSSSSTATGPPPKLCLVCSDEASVCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQATAGVSQDTSENANKTIVPAALPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSAWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQASGNLLCFAPDLIINEQRMTLPCMYDQCKHMLFISTELQRLQVSYEEYLCMKTLLLLSSVPKEGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHDVVENLLSYCFQTFLDKSMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK

Atome Classification :

(90 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DEX_H_8(1M2Z)
GCR_HUMAN
[Raw transfer]




DEX_A_4(3MNO)

[Raw transfer]




DEX_A_4(3MNP)

[Raw transfer]




DEX_A_4(3MNP)

[Raw transfer]




DEX_A_4(3MNE)

[Raw transfer]




DEX_L_12(1P93)

[Raw transfer]




DEX_I_9(1M2Z)

[Raw transfer]




DEX_A_5(3GN8)
?
[Raw transfer]




DEX_B_6(3GN8)
?
[Raw transfer]




MOF_A_6(4E2J)
?
[Raw transfer]




DAY_A_3(3BQD)

[Raw transfer]




DEX_J_10(1P93)
GCR_HUMAN
[Raw transfer]




AS4_D_4(2AA2)

[Raw transfer]




GW6_B_6(3CLD)

[Raw transfer]




C0R_C_3(2A3I)

[Raw transfer]




LSJ_A_3(4LSJ)

[Raw transfer]




1CA_D_4(1Y9R)

[Raw transfer]




1CA_E_5(2ABI)
MCR_HUMAN
[Raw transfer]




MOF_A_3(4P6W)

[Raw transfer]




DEX_I_9(1P93)
GCR_HUMAN
[Raw transfer]




DEX_K_11(1P93)
GCR_HUMAN
[Raw transfer]




1CA_C_3(2AA7)

[Raw transfer]




486_B_8(3H52)
GCR_HUMAN
[Raw transfer]




JZN_B_8(3K23)
GCR_HUMAN
[Raw transfer]




GW6_A_5(3CLD)
GCR_HUMAN
[Raw transfer]




29M_A_5(4MDD)
GCR_HUMAN
[Raw transfer]




JZN_A_7(3K23)
GCR_HUMAN
[Raw transfer]




AS4_A_4(2Q1H)
?
[Raw transfer]




1CA_A_4(3RY9)
?
[Raw transfer]




MOF_B_7(4E2J)
?
[Raw transfer]




A2K_B_5(4APU)

[Raw transfer]




1CA_C_3(1Y9R)
MCR_HUMAN
[Raw transfer]




1CA_B_7(3RY9)
?
[Raw transfer]




486_A_7(3H52)
GCR_HUMAN
[Raw transfer]




STR_F_6(1YA3)

[Raw transfer]




STR_A_3(4FN9)
?
[Raw transfer]




STR_D_4(1YA3)
MCR_HUMAN
[Raw transfer]




1CA_D_4(2ABI)
MCR_HUMAN
[Raw transfer]




1CA_F_6(2ABI)

[Raw transfer]




GOL_A_7(3ZR7)
PRGR_HUMAN
[Raw transfer]




AS0_C_3(2OVM)

[Raw transfer]




STR_B_9(4FN9)
?
[Raw transfer]




NN7_A_4(4CSJ)

[Raw transfer]




486_D_11(3H52)

[Raw transfer]




JZS_A_5(3K22)
GCR_HUMAN
[Raw transfer]




486_B_2(1NHZ)

[Raw transfer]




AS0_A_3(2OVH)

[Raw transfer]




AS0_B_5(4A2J)

[Raw transfer]




2S0_A_3(4OAR)

[Raw transfer]




STR_A_3(2AA5)
MCR_HUMAN
[Raw transfer]




MOF_A_4(1SR7)
PRGR_HUMAN
[Raw transfer]




STR_B_4(2AA5)

[Raw transfer]




HFN_A_2(4PF3)

[Raw transfer]




LD1_A_2(3VHV)

[Raw transfer]




AS0_A_3(4A2J)
PRGR_HUMAN
[Raw transfer]




STR_A_3(2AA6)
MCR_HUMAN
[Raw transfer]




OR8_A_3(4APU)
PRGR_HUMAN
[Raw transfer]




STR_B_4(2AA6)

[Raw transfer]




R18_A_3(1E3K)
PRGR_HUMAN
[Raw transfer]




SNL_A_4(2AB2)
MCR_HUMAN
[Raw transfer]




R18_B_4(1E3K)

[Raw transfer]




866_B_7(3E7C)

[Raw transfer]




866_A_5(3E7C)
GCR_HUMAN
[Raw transfer]




WOW_B_5(3KBA)

[Raw transfer]




NOG_B_4(3D90)

[Raw transfer]




JZN_C_9(3K23)

[Raw transfer]




NOG_A_3(3D90)
PRGR_HUMAN
[Raw transfer]




STR_E_5(1YA3)
MCR_HUMAN
[Raw transfer]




T98_E_5(1ZUC)

[Raw transfer]




STR_A_3(1A28)
PRGR_HUMAN
[Raw transfer]




SNL_A_2(3VHU)

[Raw transfer]




NDR_C_3(1SQN)
PRGR_HUMAN
[Raw transfer]




NDR_C_3(1SQN)
PRGR_HUMAN
[Raw transfer]




NDR_D_4(1SQN)

[Raw transfer]




WFG_A_2(3WFG)

[Raw transfer]




486_C_10(3H52)
GCR_HUMAN
[Raw transfer]




MOF_B_5(1SR7)

[Raw transfer]




T98_D_4(1ZUC)
PRGR_HUMAN
[Raw transfer]




ORC_B_8(3ZRB)

[Raw transfer]




STR_B_4(1A28)

[Raw transfer]




OR8_B_10(3ZR7)

[Raw transfer]




SNL_B_5(2AB2)

[Raw transfer]




ORB_A_3(3ZRA)
PRGR_HUMAN
[Raw transfer]




OR8_A_3(3ZR7)
PRGR_HUMAN
[Raw transfer]




GKK_B_9(3HQ5)

[Raw transfer]




WFF_A_2(3WFF)

[Raw transfer]




OR8_A_3(3ZRB)
PRGR_HUMAN
[Raw transfer]




GKK_A_7(3HQ5)
PRGR_HUMAN
[Raw transfer]




30X_B_4(3G8O)

[Raw transfer]




30X_A_3(3G8O)
PRGR_HUMAN
[Raw transfer]




JZR_A_6(3K22)
GCR_HUMAN
[Raw transfer]




ORB_B_5(3ZRA)

[Raw transfer]




EDO_A_3(4CSJ)

[Raw transfer]




6 PsiBlast_PDB 96.1198%-140 - C1 -3MNP 8.5
140 HHSearch 95.2599%-140 - C1 -3MNP 8.5
25 PsiBlast_CBE 94.3594%-146 - C1 -3E7C 8.5
4 PsiBlast_PDB 94.2199%-140 - C1 -3MNE 8.4
11 PsiBlast_PDB 93.9394%-141 - C1 -3K22 9.0 GCR_HUMAN
7 PsiBlast_PDB 93.8094%-141 - C1 -1M2Z 8.3 GCR_HUMAN
24 PsiBlast_CBE 93.6194%-139 - C1 -1M2Z 8.5
5 PsiBlast_PDB 93.1398%-142 - C1 -3MNO 8.4
15 PsiBlast_PDB 93.1092%-140 - C1 -4P6W 9.6
8 PsiBlast_PDB 92.6394%-144 - C1 -3E7C 9.5 GCR_HUMAN
21 PsiBlast_CBE 92.4792%-146 - C1 -1P93 7.5
27 PsiBlast_CBE 92.4694%-140 - C1 -3K23 11.6 GCR_HUMAN
3 PsiBlast_PDB 91.7292%-136 - C1 -4CSJ 10.1
13 PsiBlast_PDB 91.7094%-141 - C1 -3BQD 10.3
22 PsiBlast_CBE 91.6992%-147 - C1 -1P93 7.5 GCR_HUMAN
9 PsiBlast_PDB 91.6594%-142 - C1 -3CLD 9.7 GCR_HUMAN
28 PsiBlast_CBE 91.5594%-141 - C1 -3CLD 9.7
23 PsiBlast_CBE 89.7792%-141 - C1 -1P93 7.8 GCR_HUMAN
2 PsiBlast_PDB 89.7392%-141 - C1 -1P93 7.6 GCR_HUMAN
10 PsiBlast_PDB 89.5794%-130 - C1 -3K23 6.9 GCR_HUMAN
26 PsiBlast_CBE 89.5194%-137 - C1 -3K23 6.5
12 PsiBlast_PDB 88.2994%-147 - C1 -4LSJ 9.3
18 PsiBlast_PDB 87.0678%-134 - C1 -3GN8 8.7 ?
19 PsiBlast_PDB 86.4978%-134 - C1 -4E2J 9.3 ?
38 PsiBlast_CBE 86.3978%-131 - C1 -4E2J 8.9 ?
37 PsiBlast_CBE 86.2278%-134 - C1 -3GN8 8.6 ?
20 PsiBlast_PDB 85.8372%-132 - C1 -3RY9 8.8 ?
68 PsiBlast_CBE 85.7657%-133 - C1 -2AA5 7.2
34 PsiBlast_CBE 85.7193%-143 - C1 -3H52 6.0
36 PsiBlast_CBE 85.4293%-132 - C1 -3H52 8.3 GCR_HUMAN
48 PsiBlast_CBE 85.1857%-134 - C1 -3VHV 8.6
66 PsiBlast_CBE 84.4757%-137 - C1 -3VHU 9.2
50 PsiBlast_CBE 84.4757%-129 - C1 -2AB2 6.8 MCR_HUMAN
49 PsiBlast_CBE 84.4357%-131 - C1 -2AB2 7.2
53 PsiBlast_CBE 84.3657%-133 - C1 -2AA6 8.0
39 PsiBlast_CBE 84.2872%-134 - C1 -3RY9 8.5 ?
17 PsiBlast_PDB 84.1393%-131 - C1 -3H52 9.1 GCR_HUMAN
54 PsiBlast_CBE 83.8657%-134 - C1 -2AA6 7.9 MCR_HUMAN
44 PsiBlast_CBE 83.4464%-128 - C1 -4FN9 7.2 ?
41 PsiBlast_CBE 83.3465%-136 - C1 -2Q1H 7.9 ?
70 PsiBlast_CBE 83.3057%-135 - C1 -2AA2 7.6
69 PsiBlast_CBE 83.0757%-133 - C1 -2AA5 7.2 MCR_HUMAN
67 PsiBlast_CBE 83.0057%-133 - C1 -2AA7 7.6
45 PsiBlast_CBE 82.9157%-126 - C1 -4PF3 8.9
46 PsiBlast_CBE 82.2357%-125 - C1 -3WFG 7.4
35 PsiBlast_CBE 82.0293%-137 - C1 -3H52 5.2 GCR_HUMAN
16 PsiBlast_PDB 81.8991%-129 - C1 -4MDD 10.1 GCR_HUMAN
1 PsiBlast_PDB 81.8492%-133 - C1 -1NHZ 9.9
43 PsiBlast_CBE 81.7864%-127 - C1 -4FN9 7.1 ?
74 PsiBlast_CBE 81.4257%-129 - C1 -2A3I 8.7
47 PsiBlast_CBE 80.5857%-119 - C1 -3WFF 6.9
71 PsiBlast_CBE 80.5357%-139 - C1 -2ABI 6.9
79 PsiBlast_CBE 80.3955%-124 - C1 -1SR7 8.9
58 PsiBlast_CBE 80.3457%-133 - C1 -1Y9R 8.2
105 PsiBlast_CBE 79.9655%-129 - C1 -1A28 7.0 PRGR_HUMAN
72 PsiBlast_CBE 79.8057%-143 - C1 -2ABI 8.7 MCR_HUMAN
80 PsiBlast_CBE 79.5755%-124 - C1 -1SR7 9.3 PRGR_HUMAN
76 PsiBlast_CBE 79.4654%-127 - C1 -3G8O 5.7 PRGR_HUMAN
55 PsiBlast_CBE 79.4257%-142 - C1 -1YA3 6.8
106 PsiBlast_CBE 79.3155%-127 - C1 -3KBA 7.4
78 PsiBlast_CBE 79.2755%-126 - C1 -1ZUC 7.6 PRGR_HUMAN
101 PsiBlast_CBE 79.1255%-131 - C1 -3HQ5 9.3 PRGR_HUMAN
59 PsiBlast_CBE 79.1157%-135 - C1 -1Y9R 7.3 MCR_HUMAN
93 PsiBlast_CBE 79.0655%-127 - C1 -3ZR7 6.7 PRGR_HUMAN
84 PsiBlast_CBE 78.9955%-125 - C1 -4APU 11.5
56 PsiBlast_CBE 78.9857%-143 - C1 -1YA3 7.5 MCR_HUMAN
87 PsiBlast_CBE 78.9755%-125 - C1 -4A2J 9.1 PRGR_HUMAN
88 PsiBlast_CBE 78.9255%-127 - C1 -3ZRB 6.4
75 PsiBlast_CBE 78.8854%-126 - C1 -3G8O 6.5
96 PsiBlast_CBE 78.7455%-126 - C1 -3D90 6.9
91 PsiBlast_CBE 78.6955%-125 - C1 -3ZRA 6.9 PRGR_HUMAN
77 PsiBlast_CBE 78.6855%-126 - C1 -1ZUC 7.8
85 PsiBlast_CBE 78.6055%-126 - C1 -4APU 5.3 PRGR_HUMAN
90 PsiBlast_CBE 78.5855%-126 - C1 -3ZRA 6.7
57 PsiBlast_CBE 78.5857%-141 - C1 -1YA3 7.7 MCR_HUMAN
81 PsiBlast_CBE 78.4054%-126 - C1 -1SQN 7.0
100 PsiBlast_CBE 78.3455%-129 - C1 -3HQ5 9.0
104 PsiBlast_CBE 78.2655%-126 - C1 -1A28 7.6
82 PsiBlast_CBE 78.1354%-127 - C1 -1SQN 6.2 PRGR_HUMAN
141 HHSearch 78.0955%-125 - C1 -1SQN 6.2 PRGR_HUMAN
86 PsiBlast_CBE 78.0455%-125 - C1 -4A2J 6.7
97 PsiBlast_CBE 77.9355%-125 - C1 -3D90 7.5 PRGR_HUMAN
89 PsiBlast_CBE 77.9155%-127 - C1 -3ZRB 6.0 PRGR_HUMAN
73 PsiBlast_CBE 77.7757%-144 - C1 -2ABI 8.0 MCR_HUMAN
99 PsiBlast_CBE 77.7555%-126 - C1 -1E3K 6.6 PRGR_HUMAN
92 PsiBlast_CBE 77.4155%-128 - C1 -3ZR7 6.8
98 PsiBlast_CBE 77.1755%-128 - C1 -1E3K 6.9
103 PsiBlast_CBE 75.1355%-119 - C1 -2OVH 7.1
83 PsiBlast_CBE 73.5055%-114 - C1 -4OAR 7.5
102 PsiBlast_CBE 73.0055%-118 - C1 -2OVM 7.1