@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : ANM1_MOUSE: (2014-04-04 )
MAAAEAANCIMENFVATLANGMSLQPPLEEVSCGQAESSEKPNAEDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTVKVEDLTFTSPFCLQVKRNDYVHALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEDYLTVKTGEEIFGTIGMRPNAKNNRDLDFTIDLDFKGQLCELSCSTDYRMR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_A_2(3Q7E)
ANM1_RAT
[Raw transfer]




0XU_A_4(4GQB)
ANM5_HUMAN
[Raw transfer]




SAH_C_3(1ORH)
ANM1_RAT
[Raw transfer]




SAH_A_2(1ORI)
ANM1_RAT
[Raw transfer]




SAH_A_6(1OR8)
ANM1_RAT
[Raw transfer]




SAH_A_2(2FYT)
ANM3_HUMAN
[Raw transfer]




SAH_B_2(1F3L)
ANM3_RAT
[Raw transfer]




SAH_A_2(4HC4)
ANM6_HUMAN
[Raw transfer]




BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_3(3B3J)
CARM1_RAT
[Raw transfer]




CHAIN_D_4(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_C_3(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_B_2(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_C_3(4GQB)
ANM5_HUMAN
[Raw transfer]

-

SAH_A_7(3R0Q)
ANM10_ARATH
[Raw transfer]




UNL_A_4(1ORI)
ANM1_RAT
[Raw transfer]




UNL_A_3(1ORI)
ANM1_RAT
[Raw transfer]




GOL_A_8(1OR8)
ANM1_RAT
[Raw transfer]




GOL_D_4(1ORH)
ANM1_RAT
[Raw transfer]




GOL_A_9(1OR8)
ANM1_RAT
[Raw transfer]




UNL_A_7(1OR8)
ANM1_RAT
[Raw transfer]




KTD_A_2(4HSG)
ANM3_HUMAN
[Raw transfer]




BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




TDU_A_2(3SMQ)
ANM3_HUMAN
[Raw transfer]




GOL_A_4(4HC4)
ANM6_HUMAN
[Raw transfer]




EDO_A_3(4HC4)
ANM6_HUMAN
[Raw transfer]




2 PsiBlast_PDB 98.87100%-137 - C2 -1ORI 6.2 ANM1_RAT
96 HHSearch 97.5699%-134 - C2 -3Q7E 6.1 ANM1_RAT
4 PsiBlast_PDB 97.1499%-134 - C2 -3Q7E 6.1 ANM1_RAT
3 PsiBlast_PDB 97.02100%-132 - C2 -1OR8 6.6 ANM1_RAT
1 PsiBlast_PDB 96.9194%-132 - C2 -1ORH 6.2 ANM1_RAT
8 PsiBlast_PDB 83.6950%-127 - C2 -1F3L 8.0 ANM3_RAT
7 PsiBlast_PDB 81.4449%-126 - C2 -4HSG 5.8 ANM3_HUMAN
6 PsiBlast_PDB 81.3949%-128 - C2 -3SMQ 6.5 ANM3_HUMAN
99 HHSearch 80.8251%-127 - C2 -2FYT 7.5 ANM3_HUMAN
5 PsiBlast_PDB 79.9849%-127 - C2 -2FYT - ANM3_HUMAN -
21 PsiBlast_CBE 77.1533%-124 - C2 -3R0Q 7.8 ANM10_ARATH
98 HHSearch 76.7335%-120 - C2 -4HC4 7.4 ANM6_HUMAN
20 PsiBlast_CBE 76.4133%-131 - C2 -3R0Q - ANM10_ARATH -
19 PsiBlast_CBE 76.2833%-125 - C2 -3R0Q - ANM10_ARATH -
10 PsiBlast_PDB 75.6533%-123 - C2 -3R0Q - ANM10_ARATH -
101 HHSearch 75.5937%-119 - C2 -4IKP - CARM1_HUMAN -
16 PsiBlast_PDB 75.5835%-127 - C2 -3B3G - CARM1_RAT -
103 HHSearch 74.2237%-121 - C2 -3B3J - CARM1_RAT -
18 PsiBlast_PDB 73.8935%-125 - C2 -2V7E - CARM1_MOUSE -
33 PsiBlast_CBE 73.6135%-120 - C2 -3B3F - CARM1_RAT -


User Run : PsiBlast Ligand Search Result:

(6 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_A_2(3Q7E)
ANM1_RAT
[Raw transfer]




0XU_A_4(4GQB)
ANM5_HUMAN
[Raw transfer]




SAH_C_3(1ORH)
ANM1_RAT
[Raw transfer]




SAH_A_2(1ORI)
ANM1_RAT
[Raw transfer]




SAH_A_6(1OR8)
ANM1_RAT
[Raw transfer]




SAH_A_2(2FYT)
ANM3_HUMAN
[Raw transfer]




SAH_B_2(1F3L)
ANM3_RAT
[Raw transfer]




SAH_A_2(4HC4)
ANM6_HUMAN
[Raw transfer]




BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_3(3B3J)
CARM1_RAT
[Raw transfer]




CHAIN_D_4(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_C_3(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_B_2(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_C_3(4GQB)
ANM5_HUMAN
[Raw transfer]

-

SAH_A_7(3R0Q)
ANM10_ARATH
[Raw transfer]




UNL_A_4(1ORI)
ANM1_RAT
[Raw transfer]




UNL_A_3(1ORI)
ANM1_RAT
[Raw transfer]




GOL_A_8(1OR8)
ANM1_RAT
[Raw transfer]




GOL_D_4(1ORH)
ANM1_RAT
[Raw transfer]




GOL_A_9(1OR8)
ANM1_RAT
[Raw transfer]




UNL_A_7(1OR8)
ANM1_RAT
[Raw transfer]




KTD_A_2(4HSG)
ANM3_HUMAN
[Raw transfer]




BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




TDU_A_2(3SMQ)
ANM3_HUMAN
[Raw transfer]




GOL_A_4(4HC4)
ANM6_HUMAN
[Raw transfer]




EDO_A_3(4HC4)
ANM6_HUMAN
[Raw transfer]




118 78.0350%-127 - C- -4QQN - ? -
120 72.7733%-124 - C- -4QPP - ANM6_HUMAN -
119 72.7733%-126 - C- -4QQK - ANM6_HUMAN -
121 72.1934%-124 - C- -4C05 - ANM6_MOUSE -
123 19.8636% -46 - C- -3GRR - RSMA_METJA -
126 0.2432% 93 - C- -4BSJ - -