@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : ANM6_MOUSE: (2014-04-04 )
MSLSKKRKLESGDSGGAGAGGEGAEEENGGEQEAAPPRPRRTKSERDQLYYECYSDVSVHEEMIADQVRTEAYRLGILKNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRLNGLEDRVHVLPGPVETVELPERVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAELFVAPISDQMLEWRLGFWSQVKQHYGVDMSCMESFATRCLMGHSEIVVQDLSGEDVLARPQRFAQLELARAGLEQELEAGVGGRFRCSCYGSAPLHGFAVWFQVTFPGGDSEKPLVLSTSPFHPATHWKQALLYLNEPVPVEQDTDISGEITLLPSPDNPRRLRILLRYKVGDHEEKTKDFAMED

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_A_2(4HC4)
ANM6_HUMAN
[Raw transfer]




SAH_A_2(2FYT)
ANM3_HUMAN
[Raw transfer]




0XU_A_4(4GQB)
ANM5_HUMAN
[Raw transfer]




SAH_A_2(3Q7E)
ANM1_RAT
[Raw transfer]




SAH_C_3(1ORH)
ANM1_RAT
[Raw transfer]




SAH_B_2(1F3L)
ANM3_RAT
[Raw transfer]




SAH_A_2(1ORI)
ANM1_RAT
[Raw transfer]




SAH_A_6(1OR8)
ANM1_RAT
[Raw transfer]




BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_3(3B3J)
CARM1_RAT
[Raw transfer]




CHAIN_D_4(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_B_2(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_C_3(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_C_3(4GQB)
ANM5_HUMAN
[Raw transfer]

-

BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




1 PsiBlast_PDB 94.9493%-131 - C2 -4HC4 7.2 ANM6_HUMAN
76 HHSearch 94.8692%-131 - C2 -4HC4 7.2 ANM6_HUMAN
79 HHSearch 76.0836%-126 - C2 -2FYT 7.4 ANM3_HUMAN
7 PsiBlast_PDB 75.1335%-132 - C2 -2FYT 7.4 ANM3_HUMAN
3 PsiBlast_PDB 71.8735%-129 - C2 -1ORI 5.9 ANM1_RAT
82 HHSearch 71.5336%-111 - C2 -4IKP 8.0 CARM1_HUMAN
4 PsiBlast_PDB 71.4735%-126 - C2 -1OR8 6.2 ANM1_RAT
2 PsiBlast_PDB 71.3237%-116 - C2 -1F3L 7.9 ANM3_RAT
5 PsiBlast_PDB 70.8934%-124 - C2 -1ORH 6.0 ANM1_RAT
6 PsiBlast_PDB 70.8834%-125 - C2 -3Q7E - ANM1_RAT -
78 HHSearch 70.8536%-116 - C2 -3Q7E 6.6 ANM1_RAT
66 Fugue 70.4936%-111 - C2 -3Q7E - ANM1_RAT -
30 PsiBlast_CBE 70.4037%-109 - C2 -3B3F 8.3 CARM1_RAT
80 HHSearch 70.0136%-114 - C2 -3R0Q 7.4 ANM10_ARATH
9 PsiBlast_PDB 69.5037%-111 - C2 -4IKP - CARM1_HUMAN -
29 PsiBlast_CBE 69.4037%-106 - C2 -3B3F - CARM1_RAT -
31 PsiBlast_CBE 69.2837%-108 - C2 -3B3F - CARM1_RAT -
23 PsiBlast_CBE 69.2837%-107 - C2 -2Y1X - CARM1_HUMAN -
15 PsiBlast_PDB 69.2537%-113 - C2 -2V74 - CARM1_MOUSE -
35 PsiBlast_CBE 68.8637%-108 - C2 -2V74 - CARM1_MOUSE -


User Run : PsiBlast Ligand Search Result:

(7 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_A_2(4HC4)
ANM6_HUMAN
[Raw transfer]




SAH_A_2(2FYT)
ANM3_HUMAN
[Raw transfer]




0XU_A_4(4GQB)
ANM5_HUMAN
[Raw transfer]




SAH_A_2(3Q7E)
ANM1_RAT
[Raw transfer]




SAH_C_3(1ORH)
ANM1_RAT
[Raw transfer]




SAH_B_2(1F3L)
ANM3_RAT
[Raw transfer]




SAH_A_2(1ORI)
ANM1_RAT
[Raw transfer]




SAH_A_6(1OR8)
ANM1_RAT
[Raw transfer]




BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_3(3B3J)
CARM1_RAT
[Raw transfer]




CHAIN_D_4(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_B_2(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_C_3(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_C_3(4GQB)
ANM5_HUMAN
[Raw transfer]

-

BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




98 92.1799%-130 - C- -4C05 - ANM6_MOUSE -
100 91.5393%-127 - C- -4QPP - ANM6_HUMAN -
99 90.9693%-132 - C- -4QQK - ANM6_HUMAN -
103 67.6633%-126 - C- -3SMQ - ANM3_HUMAN -
101 66.8433%-125 - C- -4QQN - ? -
102 66.0833%-123 - C- -4HSG - ANM3_HUMAN -
107 0.7051% 19 - C- -4QDK - CHLM_SYNY3 -