@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : ANM7_MOUSE: (2014-04-04 )
MKVFCGRANPTTGSLEWLEEDEHYDYHQEIARSSYADMLHDKDRNIKYYQGIRAAVSRVKDRGQKALVLDIGTGTGLLSMMAVTAGADFCYAIEVFKPMAEAAVKIVERNGFSDKIKVINKHSTEVTVGPDGDLPCRANILITELFDTELIGEGALPSYEHAHKHLVQEDCEAVPHRATVYAQLVESRRMWSWNKLFPVRVRTSLGEQVIVPPSELERCPGAPSVCDIQLNQVSPADFTVLSDVLPMFSVDFSKQVSSSAACHSRQFVPLASGQAQVVLSWWDIEMDPEGKIKCTMAPFWAQTDPQELQWRDHWMQCVYFLPQEEPVVQGSPRCLVAHHDDYCVWYSLQRTSPDENDSAYQVRPVCDCQAHLLWNRPRFGEINDQDRTDHYAQALRTVLLPGSVCLCVSDGSLLSMLAHHLGAEQVFTVESSVASYRLMKRIFKVNHLEDKISVINKRPELLTAADLEGKKVSLLLGEPFFTTSLLPWHNLYFWYVRTSVDQHLAPGAVVMPQAASLHAVIVEFRDLWRIRSPCGDCEGFDVHIMDDMIKHSLDFRESREAEPHPLWEYPCRSLSKPQEILTFDFQQPIPQQPMQSKGTMELTRPGKSHGAVLWMEYQLTPDSTISTGLINPAEDKGDCCWNPHCKQAVYFLSTTLDLRVPLNGPRSVSYVVEFHPLTGDITMEFRLADTLS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_C_3(1ORH)
ANM1_RAT
[Raw transfer]




SAH_A_2(1ORI)
ANM1_RAT
[Raw transfer]




SAH_A_2(3Q7E)
ANM1_RAT
[Raw transfer]




SAH_B_2(1F3L)
ANM3_RAT
[Raw transfer]




SAH_A_2(2FYT)
ANM3_HUMAN
[Raw transfer]




SAH_A_2(4HC4)
ANM6_HUMAN
[Raw transfer]




BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_3(3B3J)
CARM1_RAT
[Raw transfer]




4IK_A_5(4IKP)
CARM1_HUMAN
[Raw transfer]




SAH_C_5(3R0Q)
ANM10_ARATH
[Raw transfer]




GOL_A_6(4IKP)
CARM1_HUMAN
[Raw transfer]




EDO_A_3(4HC4)
ANM6_HUMAN
[Raw transfer]




0XU_A_4(4GQB)
ANM5_HUMAN
[Raw transfer]




69 HHSearch 84.0123% -93 - C1 -2FYT 6.1 ANM3_HUMAN
58 HHSearch 74.0124% -83 - C1 -4LWO 5.3 ?
66 HHSearch 73.9723% -99 - C1 -3Q7E 5.4 ANM1_RAT
59 HHSearch 73.2322% -85 - C1 -3R0Q 6.7 ANM10_ARATH
30 PsiBlast_CBE 71.4324% -74 - C1 -1F3L - ANM3_RAT -
47 Fugue 70.6321% -79 - C1 -3Q7E - ANM1_RAT -
64 HHSearch 70.5624% -80 - C1 -4IKP 5.6 CARM1_HUMAN
71 HHSearch 69.6922% -93 - C1 -4HC4 4.7 ANM6_HUMAN
63 HHSearch 69.6823% -79 - C1 -4HC4 7.0 ANM6_HUMAN
68 HHSearch 69.3618% -88 - C1 -4GQB 6.1 ANM5_HUMAN
61 HHSearch 69.2320% -83 - C1 -2FYT 6.2 ANM3_HUMAN
74 HHSearch 68.0622% -88 - C1 -4LWO 4.8 ?
35 PsiBlast_CBE 67.0323% -79 - C1 -2FYT - ANM3_HUMAN -
70 HHSearch 66.8325% -72 - C1 -3B3J - CARM1_RAT -
73 HHSearch 66.6219% -95 - C1 -4IKP - CARM1_HUMAN -
62 HHSearch 66.1923% -80 - C1 -3Q7E - ANM1_RAT -
34 PsiBlast_CBE 65.3623% -80 - C1 -3SMQ - ANM3_HUMAN -
33 PsiBlast_CBE 65.2923% -78 - C1 -4HSG - ANM3_HUMAN -
19 PsiBlast_CBE 62.0734% -75 - C1 -3B3F - CARM1_RAT -
5 PsiBlast_PDB 61.5634% -80 - C1 -3B3G - CARM1_RAT -


User Run : PsiBlast Ligand Search Result:

(1 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_C_3(1ORH)
ANM1_RAT
[Raw transfer]




SAH_A_2(1ORI)
ANM1_RAT
[Raw transfer]




SAH_A_2(3Q7E)
ANM1_RAT
[Raw transfer]




SAH_B_2(1F3L)
ANM3_RAT
[Raw transfer]




SAH_A_2(2FYT)
ANM3_HUMAN
[Raw transfer]




SAH_A_2(4HC4)
ANM6_HUMAN
[Raw transfer]




BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_3(3B3J)
CARM1_RAT
[Raw transfer]




4IK_A_5(4IKP)
CARM1_HUMAN
[Raw transfer]




SAH_C_5(3R0Q)
ANM10_ARATH
[Raw transfer]




GOL_A_6(4IKP)
CARM1_HUMAN
[Raw transfer]




EDO_A_3(4HC4)
ANM6_HUMAN
[Raw transfer]




0XU_A_4(4GQB)
ANM5_HUMAN
[Raw transfer]




78 96.31100%-130 - C- -4C4A - ANM7_MOUSE -