@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : ANM8_MOUSE: (2014-04-04 )
MGMKHSSRCLLLRRKMAENAVESTEVSSAPPQPPQPVIPAKPVQCVHHVSTQPSCPGRGKMSKLLNPEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGILSMFAAKAGAKKVFGIECSSISDYSEKIIKANHLDNVITIFKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVIFARDKWLKPGGLMFPDRAALYVVAIEDRQYKDFKIHWWENVYGFDMTCIRDVAMKEPLVDIVDPKQVVTNACLIKEVDIYTVKTEELSFTSAFCLQIQRNDYVHALVTYFNIEFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYGTISMKPNAKNVRDLDFTVDLDFKGQLCETSVSNDYKMR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0XU_A_4(4GQB)
ANM5_HUMAN
[Raw transfer]




SAH_C_3(1ORH)
ANM1_RAT
[Raw transfer]




SAH_A_2(3Q7E)
ANM1_RAT
[Raw transfer]




SAH_A_2(1ORI)
ANM1_RAT
[Raw transfer]




SAH_A_6(1OR8)
ANM1_RAT
[Raw transfer]




SAH_B_2(1F3L)
ANM3_RAT
[Raw transfer]




SAH_A_2(2FYT)
ANM3_HUMAN
[Raw transfer]




SAH_A_2(4HC4)
ANM6_HUMAN
[Raw transfer]




BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_3(3B3J)
CARM1_RAT
[Raw transfer]




CHAIN_D_4(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_C_3(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_B_2(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_C_3(4GQB)
ANM5_HUMAN
[Raw transfer]

-

4MM_B_9(3EGV)
PRMA_THET8
[Raw transfer]




BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




4 PsiBlast_PDB 95.4381%-125 - C1 -1ORI 6.2 ANM1_RAT
3 PsiBlast_PDB 95.0081%-122 - C1 -1OR8 6.5 ANM1_RAT
1 PsiBlast_PDB 94.7678%-122 - C1 -1ORH 6.2 ANM1_RAT
76 Fugue 94.5583%-121 - C1 -3Q7E - ANM1_RAT -
85 HHSearch 94.0281%-121 - C1 -3Q7E 6.1 ANM1_RAT
2 PsiBlast_PDB 93.5980%-121 - C1 -3Q7E 6.1 ANM1_RAT
5 PsiBlast_PDB 87.3949%-120 - C1 -2FYT - ANM3_HUMAN -
87 HHSearch 86.7449%-122 - C1 -2FYT 7.5 ANM3_HUMAN
6 PsiBlast_PDB 85.9649%-123 - C1 -3SMQ 6.5 ANM3_HUMAN
7 PsiBlast_PDB 85.7449%-121 - C1 -4HSG 5.7 ANM3_HUMAN
8 PsiBlast_PDB 84.0048%-119 - C1 -1F3L 8.0 ANM3_RAT
90 HHSearch 78.7636%-115 - C1 -4IKP 8.1 CARM1_HUMAN
16 PsiBlast_PDB 78.0034%-114 - C1 -2V74 - CARM1_MOUSE -
24 PsiBlast_CBE 77.3734%-112 - C1 -3B3F - CARM1_RAT -
17 PsiBlast_PDB 77.2334%-119 - C1 -2V7E - CARM1_MOUSE -
23 PsiBlast_CBE 77.1534%-111 - C1 -3B3F - CARM1_RAT -
32 PsiBlast_CBE 76.9534%-116 - C1 -2V74 - CARM1_MOUSE -
28 PsiBlast_CBE 76.8834%-112 - C1 -2Y1W - CARM1_HUMAN -
13 PsiBlast_PDB 76.7734%-121 - C1 -3B3G - CARM1_RAT -
29 PsiBlast_CBE 76.5834%-111 - C1 -2Y1W - CARM1_HUMAN -


User Run : PsiBlast Ligand Search Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0XU_A_4(4GQB)
ANM5_HUMAN
[Raw transfer]




SAH_C_3(1ORH)
ANM1_RAT
[Raw transfer]




SAH_A_2(3Q7E)
ANM1_RAT
[Raw transfer]




SAH_A_2(1ORI)
ANM1_RAT
[Raw transfer]




SAH_A_6(1OR8)
ANM1_RAT
[Raw transfer]




SAH_B_2(1F3L)
ANM3_RAT
[Raw transfer]




SAH_A_2(2FYT)
ANM3_HUMAN
[Raw transfer]




SAH_A_2(4HC4)
ANM6_HUMAN
[Raw transfer]




BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_3(3B3J)
CARM1_RAT
[Raw transfer]




CHAIN_D_4(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_C_3(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_B_2(1OR8)
ANM1_RAT
[Raw transfer]

-

CHAIN_C_3(4GQB)
ANM5_HUMAN
[Raw transfer]

-

4MM_B_9(3EGV)
PRMA_THET8
[Raw transfer]




BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




107 75.9848%-119 - C- -4QQN - ? -
110 67.5735%-115 - C- -4QPP - ANM6_HUMAN -
108 67.2735%-114 - C- -4C05 - ANM6_MOUSE -
109 65.5335%-115 - C- -4QQK - ANM6_HUMAN -