@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : CARM1_MOUSE: (2014-04-05 )
MAAAAATAVGPGAGSAGVAGPGGAGPCATVSVFPGARLLTIGDANGEIQRHAEQQALRLEVRAGPDAAGIALYSHEDVCVFKCSVSRETECSRVGRQSFIITLGCNSVLIQFATPHDFCSFYNILKTCRGHTLERSVFSERTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIRILMAKSVKYTVNFLEAKEGDLHRIEIPFKFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTCLLIANKRQSYDISIVAQVDQTGSKSSNLLDLKNPFFRYTGTTPSPPPGSHYTSPSENMWNTGSTYNLSSGVAVAGMPTAYDLSSVIAGGSSVGHNNLIPLANTGIVNHTHSRMGSIMSTGIVQGSSGAQGGGGSSSAHYAVNNQFTMGGPAISMASPMSIPTNTMHYGS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SFG_D_11(2Y1W)
CARM1_HUMAN
[Raw transfer]




SFG_A_5(2Y1W)
CARM1_HUMAN
[Raw transfer]




SFG_C_9(2Y1W)
CARM1_HUMAN
[Raw transfer]




SAH_D_6(2V74)
CARM1_MOUSE
[Raw transfer]




SFG_B_7(2Y1W)
CARM1_HUMAN
[Raw transfer]




SAH_B_8(2Y1X)
CARM1_HUMAN
[Raw transfer]




SAH_D_14(2Y1X)
CARM1_HUMAN
[Raw transfer]




SAH_A_5(2Y1X)
CARM1_HUMAN
[Raw transfer]




SAH_C_11(2Y1X)
CARM1_HUMAN
[Raw transfer]




845_C_12(2Y1X)
CARM1_HUMAN
[Raw transfer]




845_A_6(2Y1X)
CARM1_HUMAN
[Raw transfer]




845_B_9(2Y1X)
CARM1_HUMAN
[Raw transfer]




845_D_15(2Y1X)
CARM1_HUMAN
[Raw transfer]




849_A_6(2Y1W)
CARM1_HUMAN
[Raw transfer]




849_D_12(2Y1W)
CARM1_HUMAN
[Raw transfer]




849_C_10(2Y1W)
CARM1_HUMAN
[Raw transfer]




849_B_8(2Y1W)
CARM1_HUMAN
[Raw transfer]




4IK_A_5(4IKP)
CARM1_HUMAN
[Raw transfer]




4IK_B_17(4IKP)
CARM1_HUMAN
[Raw transfer]




SAH_B_5(2V74)
CARM1_MOUSE
[Raw transfer]




SAH_D_8(3B3F)
CARM1_RAT
[Raw transfer]




SAH_B_6(3B3F)
CARM1_RAT
[Raw transfer]




SAH_A_5(3B3F)
CARM1_RAT
[Raw transfer]




SAH_A_2(2FYT)
ANM3_HUMAN
[Raw transfer]




SAH_A_2(4HC4)
ANM6_HUMAN
[Raw transfer]




BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_3(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_7(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_6(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_2(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_4(3B3J)
CARM1_RAT
[Raw transfer]




CHAIN_C_3(1OR8)
ANM1_RAT
[Raw transfer]

-

30 PsiBlast_CBE 91.07100%-120 - C1 -3B3F 8.1 CARM1_RAT
32 PsiBlast_CBE 90.80100%-124 - C1 -3B3F 8.2 CARM1_RAT
31 PsiBlast_CBE 90.62100%-123 - C1 -3B3F - CARM1_RAT -
85 HHSearch 90.51100%-123 - C1 -4IKP 8.4 CARM1_HUMAN
8 PsiBlast_PDB 90.51100%-123 - C1 -4IKP - CARM1_HUMAN -
4 PsiBlast_PDB 90.2699%-125 - C1 -2V74 7.8 CARM1_MOUSE
6 PsiBlast_PDB 90.00100%-122 - C1 -3B3F 8.1 CARM1_RAT
35 PsiBlast_CBE 89.70100%-120 - C1 -4IKP 8.7 CARM1_HUMAN
28 PsiBlast_CBE 89.5499%-125 - C1 -2V74 - CARM1_MOUSE -
7 PsiBlast_PDB 89.34100%-128 - C1 -3B3G 5.1 CARM1_RAT
5 PsiBlast_PDB 89.1599%-127 - C1 -2V7E - CARM1_MOUSE -
27 PsiBlast_CBE 89.1199%-125 - C1 -2V74 - CARM1_MOUSE -
84 HHSearch 88.86100%-125 - C1 -3B3J 3.6 CARM1_RAT
23 PsiBlast_CBE 87.51100%-100 - C- -2Y1W 9.4 CARM1_HUMAN
25 PsiBlast_CBE 87.11100% -97 - C- -2Y1W - CARM1_HUMAN -
2 PsiBlast_PDB 86.98100% -98 - C- -2Y1W - CARM1_HUMAN -
24 PsiBlast_CBE 86.81100% -97 - C- -2Y1W - CARM1_HUMAN -
22 PsiBlast_CBE 85.95100% -96 - C- -2Y1X 9.3 CARM1_HUMAN
20 PsiBlast_CBE 85.89100% -96 - C- -2Y1X - CARM1_HUMAN -
21 PsiBlast_CBE 85.84100% -97 - C- -2Y1X - CARM1_HUMAN -


User Run : PsiBlast Ligand Search Result:

(12 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SFG_D_11(2Y1W)
CARM1_HUMAN
[Raw transfer]




SFG_A_5(2Y1W)
CARM1_HUMAN
[Raw transfer]




SFG_C_9(2Y1W)
CARM1_HUMAN
[Raw transfer]




SAH_D_6(2V74)
CARM1_MOUSE
[Raw transfer]




SFG_B_7(2Y1W)
CARM1_HUMAN
[Raw transfer]




SAH_B_8(2Y1X)
CARM1_HUMAN
[Raw transfer]




SAH_D_14(2Y1X)
CARM1_HUMAN
[Raw transfer]




SAH_A_5(2Y1X)
CARM1_HUMAN
[Raw transfer]




SAH_C_11(2Y1X)
CARM1_HUMAN
[Raw transfer]




845_C_12(2Y1X)
CARM1_HUMAN
[Raw transfer]




845_A_6(2Y1X)
CARM1_HUMAN
[Raw transfer]




845_B_9(2Y1X)
CARM1_HUMAN
[Raw transfer]




845_D_15(2Y1X)
CARM1_HUMAN
[Raw transfer]




849_A_6(2Y1W)
CARM1_HUMAN
[Raw transfer]




849_D_12(2Y1W)
CARM1_HUMAN
[Raw transfer]




849_C_10(2Y1W)
CARM1_HUMAN
[Raw transfer]




849_B_8(2Y1W)
CARM1_HUMAN
[Raw transfer]




4IK_A_5(4IKP)
CARM1_HUMAN
[Raw transfer]




4IK_B_17(4IKP)
CARM1_HUMAN
[Raw transfer]




SAH_B_5(2V74)
CARM1_MOUSE
[Raw transfer]




SAH_D_8(3B3F)
CARM1_RAT
[Raw transfer]




SAH_B_6(3B3F)
CARM1_RAT
[Raw transfer]




SAH_A_5(3B3F)
CARM1_RAT
[Raw transfer]




SAH_A_2(2FYT)
ANM3_HUMAN
[Raw transfer]




SAH_A_2(4HC4)
ANM6_HUMAN
[Raw transfer]




BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_5(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_3(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_7(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_6(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_2(3B3J)
CARM1_RAT
[Raw transfer]




BEN_A_4(3B3J)
CARM1_RAT
[Raw transfer]




CHAIN_C_3(1OR8)
ANM1_RAT
[Raw transfer]

-

106 59.1837%-122 - C- -4QPP - ANM6_HUMAN -
105 58.6937%-119 - C- -4QQK - ANM6_HUMAN -
107 57.6438%-113 - C- -4C05 - ANM6_MOUSE -
108 57.4433%-124 - C- -4QQN - ? -
111 34.3434% -90 - C- -4C4A - ANM7_MOUSE -
109 34.3031% -97 - C- -4M38 - ANM7_TRYB2 -
110 33.8631% -96 - C- -4M37 - ANM7_TRYB2 -
113 30.8131% -79 - C- -3WST - ANM7_CAEEL -
112 30.4931% -85 - C- -3X0D - ? -
114 24.8431% -65 - C- -4QDK - CHLM_SYNY3 -
115 24.5831% -64 - C- -4QDJ - CHLM_SYNY3 -
119 3.7248% 90 - C- -3GRZ - PRMA_LACDB -