@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0072: (2015-11-28 )
MNNRIVIGISGASGSIYGMHILKALKGADCETHLVISRAGKTTIAHEITERLEDITSLADFYYSEEKIGEKIASGSFKTSGMIVAPCSMKTMSEIASGVTSNLLTRAADVTLKERRKLVLIVRESPLHLGHLQNMLKLTEMGAIIAPPMPAFYTKPKSLEDIISHSISKVLSLFDIKLPDFKEWQGV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_C_13(4RHE)
?
[Raw transfer]




FMN_A_7(4RHE)
?
[Raw transfer]




FMN_A_5(1SBZ)
PAD1_ECO57
[Raw transfer]




FMN_A_5(1SBZ)
PAD1_ECO57
[Raw transfer]




FMN_F_18(4RHE)
?
[Raw transfer]




FMN_E_16(4RHE)
?
[Raw transfer]




FMN_B_10(4RHE)
?
[Raw transfer]




FMN_D_15(4RHE)
?
[Raw transfer]




1 PsiBlast_PDB 94.2543%-132 - C3 -1SBZ 6.3 PAD1_ECO57
31 HHSearch 93.1645%-129 - C3 -1SBZ 6.3 PAD1_ECO57
21 PsiBlast_CBE 88.0734%-118 - C3 -4RHE 6.0 ?
14 PsiBlast_PDB 87.9534%-119 - C3 -4RHE 6.3 ?
23 PsiBlast_CBE 87.5634%-119 - C3 -4RHE 6.1 ?
24 PsiBlast_CBE 87.4134%-119 - C3 -4RHE 6.6 ?
13 PsiBlast_PDB 86.9534%-118 - C3 -4RHF - ? -
25 PsiBlast_CBE 86.6534%-118 - C3 -4RHE 6.4 ?
22 PsiBlast_CBE 86.6034%-117 - C3 -4RHE 6.1 ?
7 PsiBlast_PDB 86.4535%-130 - C3 -4ZAX - PAAD_PSEAE -
8 PsiBlast_PDB 86.2734%-127 - C3 -4ZAG - PAAD_PSEAE -
5 PsiBlast_PDB 86.2435%-128 - C3 -4ZAV - PAAD_PSEAE -
4 PsiBlast_PDB 86.1235%-126 - C3 -4ZAF - PAAD_PSEAE -
3 PsiBlast_PDB 86.0335%-127 - C3 -3ZQU - PAAD_PSEAE -
6 PsiBlast_PDB 85.9335%-127 - C3 -4ZAW - PAAD_PSEAE -
2 PsiBlast_PDB 85.5741%-112 - C3 -2EJB - PAAD_AQUAE -
10 PsiBlast_PDB 85.5634%-125 - C3 -4ZAY - PAAD_PSEAE -
12 PsiBlast_PDB 85.2734%-127 - C3 -4ZAZ - PAAD_PSEAE -
11 PsiBlast_PDB 85.0034%-128 - C3 -4ZAN - PAAD_PSEAE -
9 PsiBlast_PDB 84.8834%-124 - C3 -4ZAL - PAAD_PSEAE -