@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0088: (2015-11-28 )
MFIILAAGHGKRMNSGLPKVLHKIGNFSMLQHIIYNARQLNPENISVVANLPLIERLKCLEDIQLITQESTLGTGDAVKTAVRNMKELSDSNIIVVQYGDTPLIKNSTITQMVSCLEGKALVCLGFKTSNKEYGRLIIENGSLREIVETQDDENSDEEFLANAGIMVAYAKNLRELVEKIECNGSTYEYYLTDIVSIAVKSNLNVGYVTTDEEEATGINSRNDLAKAEFYFQENRRKFFTDSGVTLVAPETVFFSLDTQIGMDSIIYPYVFFGPGVRIGPGAKIGPFTKCEDTTIGDGAIVGNFVEAKASDIGTNTKIKHLSYIGNTEVGRESNIGAGTVVCNYDGKKKHRTNIGSNCFVGANSSLIAPLNVHDESVIAAGSIIVKDVPKKRLVITRRKQMVKKIK

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UD1_B_14(2OI6)
GLMU_ECOLI
[Raw transfer]




UD1_A_13(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_B_14(2OI5)
GLMU_ECOLI
[Raw transfer]




UD1_A_7(4G3Q)
GLMU_MYCTU
[Raw transfer]




UD1_A_4(3DJ4)
GLMU_MYCTU
[Raw transfer]




UD1_A_7(4G3P)
?
[Raw transfer]




UD1_A_4(1G97)
GLMU_STRPN
[Raw transfer]




UD1_A_13(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_A_2(3D8V)
GLMU_MYCTU
[Raw transfer]




UD1_A_13(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_B_11(1HV9)
GLMU_ECOLI
[Raw transfer]




UD1_B_13(2OI7)
GLMU_ECOLI
[Raw transfer]




UD1_B_14(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_A_2(4G3S)
GLMU_MYCTU
[Raw transfer]




UD1_A_6(4G87)
GLMU_MYCTU
[Raw transfer]




UD1_A_8(3ST8)
GLMU_MYCTU
[Raw transfer]




UD1_A_6(3SPT)
GLMU_MYCTU
[Raw transfer]




UD1_A_12(2OI7)
GLMU_ECOLI
[Raw transfer]




UD1_A_13(2OI6)
GLMU_ECOLI
[Raw transfer]




UD1_A_13(2OI5)
GLMU_ECOLI
[Raw transfer]




UD1_A_10(1HV9)
GLMU_ECOLI
[Raw transfer]




UD1_A_10(1HV9)
GLMU_ECOLI
[Raw transfer]




1S9_A_2(4KNX)
GLMU_HAEIN
[Raw transfer]




1S8_A_2(4KNR)
GLMU_HAEIN
[Raw transfer]




LZR_A_2(2W0V)
GLMU_HAEIN
[Raw transfer]




0N5_A_6(4E1K)
GLMU_HAEIN
[Raw transfer]




LZS_A_2(2W0W)
GLMU_HAEIN
[Raw transfer]




GN1_A_5(4K6R)
GLMU_MYCTO
[Raw transfer]




1SF_A_2(4KPZ)
GLMU_HAEIN
[Raw transfer]




GN1_A_3(4HCQ)
GLMU_MYCTU
[Raw transfer]




MES_M_13(1FXJ)
GLMU_ECOLI
[Raw transfer]




POP_A_7(4G87)
GLMU_MYCTU
[Raw transfer]




POP_A_4(4G3S)
GLMU_MYCTU
[Raw transfer]




9 PsiBlast_PDB 91.7435%-115 - C3 -4E1K 6.2 GLMU_HAEIN
4 PsiBlast_PDB 91.6135%-115 - C3 -2V0K - GLMU_HAEIN -
2 PsiBlast_PDB 91.4535%-112 - C3 -2V0I - GLMU_HAEIN -
13 PsiBlast_PDB 91.3535%-112 - C3 -4KPZ 4.8 GLMU_HAEIN
14 PsiBlast_PDB 91.3435%-110 - C3 -4KQL - GLMU_HAEIN -
8 PsiBlast_PDB 91.3135%-115 - C3 -2W0W 8.8 GLMU_HAEIN
5 PsiBlast_PDB 90.9135%-115 - C3 -2V0L - GLMU_HAEIN -
6 PsiBlast_PDB 90.8935%-111 - C3 -2VD4 - GLMU_HAEIN -
11 PsiBlast_PDB 90.8835%-110 - C3 -4KNX 7.0 GLMU_HAEIN
7 PsiBlast_PDB 90.7335%-112 - C3 -2W0V 6.8 GLMU_HAEIN
10 PsiBlast_PDB 90.5435%-113 - C3 -4KNR 7.6 GLMU_HAEIN
3 PsiBlast_PDB 90.5435%-112 - C3 -2V0J - GLMU_HAEIN -
93 HHSearch 90.5035%-117 - C3 -2V0H - GLMU_HAEIN -
1 PsiBlast_PDB 90.3635%-112 - C3 -2V0H - GLMU_HAEIN -
12 PsiBlast_PDB 90.2035%-109 - C3 -4KPX - GLMU_HAEIN -
15 PsiBlast_PDB 88.0933%-113 - C3 -4FCE - GLMU_YERPE -
117 Fugue 86.8733%-112 - C3 -1HV9 7.5 GLMU_ECOLI
16 PsiBlast_PDB 86.1833%-108 - C3 -3FWW - GLMU_YERPP -
27 PsiBlast_CBE 86.1432%-105 - C3 -2OI7 7.1 GLMU_ECOLI
29 PsiBlast_CBE 86.0732%-107 - C3 -2OI6 7.6 GLMU_ECOLI
28 PsiBlast_CBE 85.8232%-105 - C3 -2OI6 9.2 GLMU_ECOLI
30 PsiBlast_CBE 85.5632%-106 - C3 -2OI5 8.8 GLMU_ECOLI
116 Fugue 85.4337%-107 - C3 -1HM9 8.2 GLMU_STRPN
33 PsiBlast_CBE 85.3832%-105 - C3 -1HV9 7.5 GLMU_ECOLI
31 PsiBlast_CBE 84.4532%-107 - C3 -2OI5 7.5 GLMU_ECOLI
35 PsiBlast_CBE 84.1731%-112 - C3 -4HCQ 2.7 GLMU_MYCTU
19 PsiBlast_PDB 84.1034%-105 - C3 -1HM9 8.5 GLMU_STRPN
26 PsiBlast_CBE 83.9532%-103 - C3 -2OI7 8.8 GLMU_ECOLI
32 PsiBlast_CBE 83.6032%-103 - C3 -1HV9 9.0 GLMU_ECOLI
38 PsiBlast_CBE 83.0931%-105 - C3 -4G3Q 7.0 GLMU_MYCTU
21 PsiBlast_CBE 83.0934%-102 - C3 -1HM9 8.5 GLMU_STRPN
40 PsiBlast_CBE 83.0831%-107 - C3 -3ST8 7.1 GLMU_MYCTU
43 PsiBlast_CBE 82.8331%-109 - C3 -3D8V 7.4 GLMU_MYCTU
37 PsiBlast_CBE 82.8131%-109 - C3 -4G3S 7.8 GLMU_MYCTU
39 PsiBlast_CBE 82.7331%-110 - C3 -4G3P 7.9 ?
25 PsiBlast_CBE 82.3234%-102 - C3 -1G97 8.9 GLMU_STRPN
34 PsiBlast_CBE 81.9931%-104 * C3 *4K6R 4.0 GLMU_MYCTO
41 PsiBlast_CBE 81.8031%-106 - C3 -3SPT 7.1 GLMU_MYCTU
36 PsiBlast_CBE 81.7131%-107 - C3 -4G87 6.8 GLMU_MYCTU
42 PsiBlast_CBE 81.1331%-106 - C3 -3DJ4 8.1 GLMU_MYCTU
94 HHSearch 80.2335%-106 - C3 -1HM9 7.5 GLMU_STRPN