@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0107: (2015-11-28 )
MAHIPVLLKEMLLQLSPQNGGIYVDATFGAGGYSKAILESADCKVYAIDRDKTVIKFYEDLNIKYPSRVKLFIEKFSNIRSILDSNSLEYLVEPSAVSKLSSIISSGIQKKNIWISASSTGVTPSNTVDGVVFDIGVSSMQLDDGDRGFSFLHDGPLDMRMDNSSHTNASTFVNALREEEIANTIYNYGGERHSRRIARAIVNARKKKTIKTTFELANIVRSVVFRGKSKIDPATRTFQAIRIWVNDELGELEKGIKAASEILNKNGKLIVVTFHSLEDRIVKTFFKSLCEPRSIDCKVFSLLNKKMIKASAEEVNANPRSRSAKLRAIQRLS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_A_5(1M6Y)
RSMH_THEMA
[Raw transfer]




SAH_A_5(1M6Y)
RSMH_THEMA
[Raw transfer]




SAM_A_5(1N2X)
RSMH_THEMA
[Raw transfer]




SAM_A_2(3TKA)
RSMH_ECOLI
[Raw transfer]




SAM_A_2(3TKA)
RSMH_ECOLI
[Raw transfer]




22 HHSearch 95.9842% -86 - C6 -1M6Y 7.0 RSMH_THEMA
23 HHSearch 95.1943% -91 - C6 -1WG8 - RSMH_THET8 -
21 HHSearch 94.9840% -85 * C6 *3TKA 9.6 RSMH_ECOLI
3 PsiBlast_PDB 93.5736% -89 - C6 -1M6Y 7.0 RSMH_THEMA
4 PsiBlast_PDB 93.3336% -87 - C6 -1N2X 8.3 RSMH_THEMA
2 PsiBlast_PDB 92.9535% -89 - C6 -3TKA 9.6 RSMH_ECOLI
19 PsiBlast_CBE 92.7239% -90 - C6 -1WG8 - RSMH_THET8 -
1 PsiBlast_PDB 90.5139% -84 - C6 -1WG8 - RSMH_THET8 -
41 Fugue 89.7439% -70 - C6 -1M6Y - RSMH_THEMA -
42 Fugue 58.5422% -68 - C6 -4PON - ? -
6 PsiBlast_PDB 45.7631% -68 - C6 -4PON - ? -
40 HHSearch 45.1422% -55 - C6 -3EEY - ? -
43 Fugue 45.0818% -28 - C4 -4O7O - MAK1_MYCTU -
20 PsiBlast_CBE 44.1231% -65 - C6 -4POO - ? -
37 HHSearch 43.609% -77 - C6 -1DL5 - PIMT_THEMA -
7 PsiBlast_PDB 43.5431% -69 - C6 -4POO - ? -
27 HHSearch 43.2727% -55 - C6 -2YXL - ? -
44 Fugue 42.6713% -28 - C6 -3EEY - ? -
38 HHSearch 42.1516% -45 - C6 -2PWY - TRMI_THET2 -
24 HHSearch 41.3613% -47 - C6 -3AJD - TRM4_METJA -