@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0138: (2015-11-28 )
MMELKMHNVKGTENLKFDAEVGKVLNIVIHSLYTNKDIFLRELVSNASDACDKLRYESQLNPNLLDSSGELKITISSNKDENELYVTDNGIGMSRQDLIGNLGTIASSGTQKFLDAIKNSKDSSQAVELIGKFGVGFYSSFMVASEVIVESRKAGEEESWVWRSTGDGEYSISKLDNQIPCGTKITLVMRPEENEFLDKFRIENIVTTYSDHINFPVEFIDEEGKSEKLNSKAAIWTKLKNDVTQEEHNDFFRGVAHVGGEPWMILHNKNEGAIEYTNLLYVPSIKPFDLFHPDRRCSVKLYVNKVFITEDNVQIIPQYLRFLKGVVDSPDLPLNISRETLQNNRVVEQIRKSLTKRVISELGKKAKENLEEYTKFWTNFGAVLKEGLCEAMPTEEREALLSICRFHSTGDKKLVSIDDYISRMKPEQGYIYYLTGNSLDSVKNSPQLEGFISKGLEVLLFVDPVDDFWTSVIHEYKGQKFKSVTRADVDLEKFSPEEKDKENKSDEERAEGNTDSILQYFTKVLGNAVKSVKISKKLTDSPVCLAVDEGAMDLRMERFLREQNQLNYRTPKVLEVNTKHSVIKSIIKSYAENGENPTLEDMVHLLFYQACIVEGEEMDDASLFAKKLNNLLGKVII

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_9(2O1U)
?
[Raw transfer]



ANP_A_8(2O1U)
?
[Raw transfer]



ANP_A_8(2O1U)
?
[Raw transfer]



ANP_A_8(2O1U)
?
[Raw transfer]



ADP_B_8(2O1V)
ENPL_CANFA
[Raw transfer]



ADP_B_6(1Y4S)
HTPG_ECOLI
[Raw transfer]



ADP_A_5(1Y4S)
HTPG_ECOLI
[Raw transfer]



ADP_A_5(1Y4S)
HTPG_ECOLI
[Raw transfer]



ADP_A_7(2O1V)
ENPL_CANFA
[Raw transfer]
21 PsiBlast_CBE 89.1941% -80 - C2 -2IOP - HTPG_ECOLI -
23 PsiBlast_CBE 87.8135% -81 - C2 -2O1V 4.5 ENPL_CANFA
103 HHSearch 87.6042% -80 - C2 -2IOQ - HTPG_ECOLI -
1 PsiBlast_PDB 87.1241% -80 - C2 -2IOQ - HTPG_ECOLI -
24 PsiBlast_CBE 86.6135% -80 - C2 -2O1U 4.8 ?
5 PsiBlast_PDB 85.9135% -77 - C2 -2O1V 2.4 ENPL_CANFA
101 HHSearch 85.5135% -79 - C2 -2O1U 4.6 ?
122 Fugue 84.9834% -75 - C2 -2O1U 4.6 ?
4 PsiBlast_PDB 84.8335% -77 - C2 -2O1U 4.6 ?
7 PsiBlast_PDB 84.7231% -83 - C4 -4J0B - ? -
102 HHSearch 83.1535% -70 - C2 -2CG9 - HSP82_YEAST -
25 PsiBlast_CBE 81.3331% -74 - C4 -4J0B - ? -
8 PsiBlast_PDB 77.1036% -89 - C4 -4Z1F - TRAP1_HUMAN -
10 PsiBlast_PDB 76.6936% -84 - C4 -4Z1H - TRAP1_HUMAN -
3 PsiBlast_PDB 76.6143% -77 - C2 -1Y4U - HTPG_ECOLI -
27 PsiBlast_CBE 76.3836% -85 - C4 -4Z1I - TRAP1_HUMAN -
9 PsiBlast_PDB 76.0736% -87 - C4 -4Z1G - TRAP1_HUMAN -
22 PsiBlast_CBE 75.9643% -80 - C2 -1Y4S 5.1 HTPG_ECOLI
6 PsiBlast_PDB 75.5038% -77 - C2 -2O1W - ? -
107 HHSearch 74.0944% -77 - C2 -1Y4S 5.1 HTPG_ECOLI
2 PsiBlast_PDB 73.9443% -77 - C2 -1Y4S 5.1 HTPG_ECOLI