@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0150: (2015-11-28 )
MKKFLEGLLIWLVIIVLISVAYIQFSGNIGKSKTTIPFSEFLTKLEDNDIENIVIKNQSIEGKFRDGSNFNSSGIIYSDLIKGLHDKKVKFSFSTGDSAMSIIGRLLIQWIPTFIFIGLLLFLLKQTQTGGNRTISFGKSKARLMTSGKKVTFDDVAGIDEAKEELVEIVDFLKQRQKFQVLGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFDQGKKNAPCIIFIDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIVAATNRPDVLDPALLRPGRFDRQITISLPDINGRERILNTHIKKISIAPDVNVKTVARGTPGFSGADLANLVNESALIAARRNKKIVTMDDFEYARDKVMMGVERRSLMMTEEEKKLTAYHEAGHAIVAVNMSASDPIHKATIIPRGRALGLVMRLPETDRVSHTREKMIADITVAMGGRVAEELIFGYDKITSGASSDIKQASDLSRAMVTKWGMSDKIGPVYHNREQNVHSSDIISEDTLKLIDEEVKRVVSSCYEKAKDILTKRCKDLELIAENLLEFETLTGDEIKDILSGKKIVRNDNESKEKVRKSSL

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_C_8(2R65)
FTSH_HELPY
[Raw transfer]




AGS_B_5(4KO8)
TERA_HUMAN
[Raw transfer]




AGS_A_3(4KO8)
TERA_HUMAN
[Raw transfer]




ADP_B_5(3H4M)
PAN_METJA
[Raw transfer]




AGS_B_5(3HU3)
TERA_HUMAN
[Raw transfer]




ADP_A_5(4WW0)
FTSH_AQUAE
[Raw transfer]




ADP_B_7(4WW0)
FTSH_AQUAE
[Raw transfer]




ADP_E_10(2R65)
FTSH_HELPY
[Raw transfer]




AGS_A_3(3HU3)
TERA_HUMAN
[Raw transfer]




ADP_C_9(4WW0)
FTSH_AQUAE
[Raw transfer]




ADP_C_6(3H4M)
PAN_METJA
[Raw transfer]




ADP_A_6(2R65)
FTSH_HELPY
[Raw transfer]




ADP_A_2(2QZ4)

[Raw transfer]




ADP_A_2(2QZ4)

[Raw transfer]




ADP_B_7(2R65)
FTSH_HELPY
[Raw transfer]




ADP_D_9(2R65)
FTSH_HELPY
[Raw transfer]




ADP_A_4(3H4M)
PAN_METJA
[Raw transfer]




ADP_A_4(3H4M)
PAN_METJA
[Raw transfer]




ADP_A_2(1E32)
TERA_MOUSE
[Raw transfer]




ANP_B_2(1IY0)
FTSH_THET8
[Raw transfer]




ADP_A_2(1E32)
TERA_MOUSE
[Raw transfer]




ADP_B_2(1IY1)
FTSH_THET8
[Raw transfer]




24 PsiBlast_CBE 95.1156% -95 - C1 -2CE7 - FTSH_THEMA -
22 PsiBlast_CBE 93.9656% -97 - C1 -2CEA - FTSH_THEMA -
25 PsiBlast_CBE 93.9556% -97 - C1 -2CE7 - FTSH_THEMA -
23 PsiBlast_CBE 93.8256% -97 - C1 -2CEA - FTSH_THEMA -
26 PsiBlast_CBE 93.7456% -96 - C1 -2CE7 - FTSH_THEMA -
21 PsiBlast_CBE 93.5156% -96 - C1 -2CEA - FTSH_THEMA -
126 Fugue 93.3257% -90 - C1 -2CE7 - FTSH_THEMA -
1 PsiBlast_PDB 93.2156% -92 - C1 -3KDS - FTSH_THEMA -
37 PsiBlast_CBE 90.2254% -89 - C1 -4Z8X - FTSH_AQUAE -
4 PsiBlast_PDB 90.0654% -89 - C1 -4WW0 8.4 FTSH_AQUAE
39 PsiBlast_CBE 89.5654% -90 - C1 -4WW0 8.0 FTSH_AQUAE
5 PsiBlast_PDB 88.7954% -87 - C1 -4Z8X - FTSH_AQUAE -
40 PsiBlast_CBE 88.6754% -86 - C1 -4WW0 8.3 FTSH_AQUAE
38 PsiBlast_CBE 88.0054% -87 - C1 -4Z8X - FTSH_AQUAE -
104 HHSearch 85.3954% -86 - C1 -2DHR - FTSH_THET8 -
2 PsiBlast_PDB 84.9154% -85 - C1 -2DHR - FTSH_THET8 -
28 PsiBlast_CBE 84.3354% -88 - C1 -2DHR - FTSH_THET8 -
27 PsiBlast_CBE 84.1954% -83 - C1 -2DHR - FTSH_THET8 -
31 PsiBlast_CBE 84.1854% -83 - C1 -2DHR - FTSH_THET8 -
33 PsiBlast_CBE 84.1654% -83 - C1 -4EIW - FTSH_THET8 -
12 PsiBlast_PDB 70.1165% -98 - C1 -1IY1 5.5 FTSH_THET8
11 PsiBlast_PDB 69.6765% -95 - C1 -1IY0 5.2 FTSH_THET8
42 PsiBlast_CBE 67.8861%-110 - C1 -2R65 5.3 FTSH_HELPY
41 PsiBlast_CBE 66.7861% -98 - C1 -2R65 5.5 FTSH_HELPY
43 PsiBlast_CBE 66.2061% -98 - C1 -2R65 7.1 FTSH_HELPY
44 PsiBlast_CBE 66.0161%-101 - C1 -2R65 5.6 FTSH_HELPY
99 PsiBlast_CBE 64.2741% -99 - C1 -3HU3 8.0 TERA_HUMAN
8 PsiBlast_PDB 63.9661%-100 - C1 -2R65 6.4 FTSH_HELPY
98 PsiBlast_CBE 63.8541% -98 - C1 -3HU3 8.1 TERA_HUMAN
46 PsiBlast_CBE 63.7546% -90 - C1 -3H4M 7.1 PAN_METJA
83 PsiBlast_CBE 63.5541% -96 - C1 -1E32 6.7 TERA_MOUSE
96 PsiBlast_CBE 63.5441% -97 - C1 -4KO8 8.2 TERA_HUMAN
97 PsiBlast_CBE 63.5341% -98 - C1 -4KO8 8.3 TERA_HUMAN
113 HHSearch 63.3251%-102 - C1 -2QZ4 7.9
45 PsiBlast_CBE 62.3246% -92 - C1 -3H4M 6.4 PAN_METJA
13 PsiBlast_PDB 61.9250%-104 - C1 -2QZ4 8.0
14 PsiBlast_PDB 61.4446% -89 - C1 -3H4M 7.5 PAN_METJA
128 Fugue 59.8930% -77 - C1 -1E32 6.7 TERA_MOUSE
120 HHSearch 58.7944% -84 - C1 -3H4M 7.5 PAN_METJA