@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0181: (2015-11-29 )
MDLNKFTEKAKSLIQSAQMKALGTGHQVFMPEHLLKVMLEDESGLVQDLIGACGGNAQSISDAVNNAIKKFPIVKGPGSNSLQLSREVAKVFEDSIGMARRNKDSFVTVERLLQGLTAQKNDTVGKILAENGITPQKLNSVITEMRKGSSADSPNSEENLNAAKKYTKDVTELAMQGKLDPVIGRDEEIRRTMQVSLRRTKNNPVLIGEPGVGKTAIVEGLANRIVANDVPLGLHDAKVLALDLGALIAGTKFRGEFEERLKAVINELAKAEGKIILFIDELHTLVGAGATSGAMDASNLLKPALARGEIRCIGATTLDEYREHIEKDPALARRFQPVFISQPTETDTVSILRGLKERYEVHHGIRITDGAIIAAAMLSNRYITDRFLPDKAIDLIDEAASRVRIEMDSKPEIIDELERKIVQLKIESEVLKKERDENSKQRLKKINEEIENLNSKFTDLNSKWQMEKNKIARIQETAEKLDNARKELELAQRSGKLEKAGELMYGVIPHLENELMNQEKVTDSFLKKEVTEDDIANIVSKWTGIPVDNMMHSEKEKLLSMENEIGKRVIGQKDAIEAISNAVRRSRSGVQDTNRPFGSFLFLGPTGVGKTELAKALAEFLFDDQSALLRFDMSEYMEKHSVSKLIGAPPGYVGYEQGGRLTEAVRRRPYQVILFDEIEKANPDIFNLLLQILDEGRLTDSHGKLIDFRNTILILTSNLGAEIMLKGVADFVKSEVMQIVKSAFRPEFLNRLDEIIIFHSLTKDDIYKIIDVQFLYLQKIIVKRKLSISLSQEAKELIAQAGYDPEYGVRPLKRVIQECIQNNLAKLVLSGEVAEGDKLIVYAFNNEILVKKV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_2(4LJA)

[Raw transfer]




ACP_A_2(4LJ9)

[Raw transfer]




MNT_C_8(4LJ7)

[Raw transfer]




MNT_A_4(4LJ7)
CLPB_THET8
[Raw transfer]




MNT_B_6(4LJ7)
CLPB_THET8
[Raw transfer]




ADP_D_6(4FD2)

[Raw transfer]




ADP_A_2(4LJ5)

[Raw transfer]




ADP_B_5(4FD2)
CLPB_THET8
[Raw transfer]




ADP_A_4(4FD2)
CLPB_THET8
[Raw transfer]




ADP_A_4(4FCV)
CLPB_THET8
[Raw transfer]




ADP_A_4(4FCW)
CLPB_THET8
[Raw transfer]




132 Fugue 84.5552% -87 - C3 -1QVR - CLPB_THET8 -
106 HHSearch 77.4147% -91 - C7 -3PXI - CLPC_BACSU -
1 PsiBlast_PDB 76.6943% -91 - C7 -3PXI - CLPC_BACSU -
105 HHSearch 74.2540% -93 - C7 -1R6B - CLPA_ECOLI -
22 PsiBlast_CBE 60.9259%-128 - C4 -4LJ7 7.5 CLPB_THET8
11 PsiBlast_PDB 60.8458%-126 - C4 -4FCW 6.5 CLPB_THET8
4 PsiBlast_PDB 60.4460%-119 - C4 -4LJ5 5.3
5 PsiBlast_PDB 60.3859%-128 - C4 -4LJ7 8.6 CLPB_THET8
3 PsiBlast_PDB 60.3360%-117 - C4 -4LJ4 - -
7 PsiBlast_PDB 60.2759%-116 - C4 -4LJA 6.5
9 PsiBlast_PDB 60.1059%-128 - C4 -4FD2 5.6 CLPB_THET8
21 PsiBlast_CBE 59.8559%-130 - C4 -4LJ7 5.9
23 PsiBlast_CBE 59.7959%-130 - C4 -4FD2 5.5
10 PsiBlast_PDB 59.7658%-125 - C4 -4FCV 5.6 CLPB_THET8
24 PsiBlast_CBE 59.3659%-128 - C4 -4FD2 6.6 CLPB_THET8
2 PsiBlast_PDB 58.6860% -74 - C6 -4HSE - CLPB_THET8 -
6 PsiBlast_PDB 58.6459%-110 - C4 -4LJ9 5.7
8 PsiBlast_PDB 58.5359%-135 - C4 -4FCT - CLPB_THET8 -
15 PsiBlast_PDB 56.2443%-102 - C4 -1R6B - CLPA_ECOLI -
14 PsiBlast_PDB 55.1343% -96 - C4 -1KSF - CLPA_ECOLI -