@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0223: (2015-11-29 )
MCGIFGAVSDGDSVIPTLLAGLRKLEYRGYDSSGIAIINNEGKIEVQKSEGKVERLCEVVGNSRMSSSTVGIAHTRWATHGIPDLKNAHPIRTNNVVVAHNGVIENYNLLKKGLEERGIPFHTDTDTEVIPNMLTLYLNEGLSPIDSLFKCLSNLHGSFALVLLFAEYPDVLFVAKRSLPLAIGYNYNTVFAASDSNTLNTLVERISYLEDNDVAVIKSSGVSIYNNGAQVKRSIENNSSSSFLISKNGYSSFMLKEIFEQPCVLNKTINQFYKKYTEVISTSKKLFSKLSYITIVGCGSSYFAGLIAKYWLESVAQVRVYLEISSEFRYSNIRLEEGSIGLFISQSGETADTMEALRYAKSQKQTTISITNTFNSGIEKISDVVLHTLAGPEIGVASTKTFSTQLAILACFTLELAKIKDTIDEKRTKQLSNAINSIPEYVEYVLNVIKIQHIPDIILEHNSIILIGRGSSYGVAMEGALKIKELSYINTIGIAAGEMKHGSIALIDSSVLVIAIIPYDNLFFKTLSNIQEVIARKGKVIAFSDKQGVPFLREICKEVIQLPDIDNFISPIIYSVAMQFLAHSVAIEKGLDADCPRNLAKSVTVE

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GLP_A_2(1MOQ)
?
[Raw transfer]




AGP_A_6(1MOS)
GLMS_ECOLI
[Raw transfer]




GLP_X_2(2VF5)
GLMS_ECOLI
[Raw transfer]




G6Q_B_4(2J6H)
GLMS_ECOLI
[Raw transfer]




GLP_A_2(1MOQ)
GLMS_ECOLI
[Raw transfer]




G6P_A_2(1MOR)
GLMS_ECOLI
[Raw transfer]




GLP_A_2(1MOQ)
GLMS_ECOLI
[Raw transfer]




AGP_A_2(2ZJ4)
GFPT1_HUMAN
[Raw transfer]




G6P_A_2(2ZJ3)
GFPT1_HUMAN
[Raw transfer]




G6P_A_2(2ZJ3)
GFPT1_HUMAN
[Raw transfer]




G6Q_A_3(2J6H)
GLMS_ECOLI
[Raw transfer]




BG6_B_4(2PUW)
GFA1_CANAL
[Raw transfer]




BG6_A_3(2PUW)
GFA1_CANAL
[Raw transfer]




25 PsiBlast_CBE 97.0239%-103 - C2 -2J6H 4.4 GLMS_ECOLI
1 PsiBlast_PDB 96.6840%-107 - C2 -4AMV - GLMS_ECOLI -
21 PsiBlast_CBE 96.5640%-108 - C2 -4AMV - GLMS_ECOLI -
3 PsiBlast_PDB 96.2039%-104 - C2 -2J6H 3.6 GLMS_ECOLI
28 PsiBlast_CBE 96.0939%-114 - C2 -3OOJ - GLMS_ECOLI -
30 PsiBlast_CBE 96.0139%-111 - C2 -3OOJ - GLMS_ECOLI -
22 PsiBlast_CBE 95.9540%-104 - C2 -4AMV - GLMS_ECOLI -
29 PsiBlast_CBE 95.8739%-107 - C2 -3OOJ - GLMS_ECOLI -
27 PsiBlast_CBE 95.7139%-111 - C2 -3OOJ - GLMS_ECOLI -
2 PsiBlast_PDB 95.5840%-104 - C2 -1JXA - GLMS_ECOLI -
32 PsiBlast_CBE 95.4639%-107 - C2 -3OOJ - GLMS_ECOLI -
31 PsiBlast_CBE 95.1039%-106 - C2 -3OOJ - GLMS_ECOLI -
6 PsiBlast_PDB 94.9839%-104 - C2 -3OOJ - GLMS_ECOLI -
26 PsiBlast_CBE 94.9339%-103 - C2 -3OOJ - GLMS_ECOLI -
23 PsiBlast_CBE 94.3940%-102 - C2 -1JXA - GLMS_ECOLI -
24 PsiBlast_CBE 94.3640%-102 - C2 -1JXA - GLMS_ECOLI -
11 PsiBlast_PDB 73.1337%-103 - C2 -2ZJ3 4.0 GFPT1_HUMAN
12 PsiBlast_PDB 72.9737%-101 - C2 -2ZJ4 4.6 GFPT1_HUMAN
8 PsiBlast_PDB 72.9340%-102 - C2 -1MOS 4.9 GLMS_ECOLI
9 PsiBlast_PDB 72.3440%-104 - C2 -1MOQ 4.7 GLMS_ECOLI
10 PsiBlast_PDB 71.7740%-102 - C2 -1MOR 4.5 GLMS_ECOLI
5 PsiBlast_PDB 71.2939%-105 - C2 -2VF5 3.3 GLMS_ECOLI
61 HHSearch 70.6436%-100 * C2 *2ZJ3 4.0 GFPT1_HUMAN
66 HHSearch 70.2939%-103 - C2 -1MOQ 4.7 GLMS_ECOLI
36 PsiBlast_CBE 66.3534% -94 - C2 -2PUW 3.0 GFA1_CANAL
17 PsiBlast_PDB 65.3034% -95 - C2 -2PUW 2.9 GFA1_CANAL
90 Fugue 50.5837%-108 - C2 -1MOQ Error ?