@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0257: (2015-11-29 )
MNLKAQYQDHLLFYRLGDFYELFFDDAIKAAKLLNIVLTKRGNSYGQEVPMCGVPAHSSESYLHKLIDLGFKVAICDQLETADEAKRRGYKSIVKRDVVRIVTPGTIVEDSLLEDKNNNYLASIVKQNGEYAIGWLELSTGKFFHTLTNLKALDSDLLRISPKELLISDELAEDEKIRSILKNYKISITQHAQSFFEYNKSNRTLCEFYKVRELGVIGSFSKVEIMACGALLEYVKVTQRGSVPRLELPEPYKQQNFMLVDASARRNLELFLTQFGEKKGSLISVIDHTVTASGGRLLKQMLASPLACSKAINLRLSTVEFFVNNYESRKRIREILSNIPDIERSLSRLMLERGSPKDINLLKVGLGKTLELSEFLYKIESGKNESLLQQYVIPVLDTGIQPALNAEITVKSDENELSTIYKSLGNHKDLFELLNSAMLDNNLSSVKEGGFINPKYNQELSELSYVLSNSNKLITRLRESYRDLTGIAALKILHNNMLGYYIEVSANHKITSDIFIHRQSLANSMRYTTNELKELENKILTARDAVISLEIKIFGELCSEIAKESERIALTANALAKLDIRTAFAELAVQNDYTKPIINDSKEFNICNGRHPVVEVNDKFIANSINLSGIHLITGPNMAGKSTFLRQNALIAILAHMGSFVPADSAHIGVIDKIFSRVGATDNITAGYSTFMVEMIETATIVNQATDRSLVILDEIGRGTGVYDGLSIAQAVIEHIHNVNKCRAIFATHYHELTKVSKYLKSVKCFCVRIKEWKEEVIFLHEVVEGVADESYGIHVAKLAGFPDSILNRASEVFKELKA

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_E_1(1WB9)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_3(3K0S)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1WBB)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1WB9)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1WB9)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_3(1E3M)
MUTS_ECOLI
[Raw transfer]
-
NACID_F_4(3K0S)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1WBB)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1WBD)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1OH8)
MUTS_ECOLI
[Raw transfer]
-
NACID_F_4(1E3M)
MUTS_ECOLI
[Raw transfer]
-
NACID_F_6(3ZLJ)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1OH5)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_5(3ZLJ)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1WBD)
MUTS_ECOLI
[Raw transfer]
-
NACID_F_2(1OH7)
MUTS_ECOLI
[Raw transfer]
-
CHAIN_F_4(2WTU)
MUTS_ECOLI
[Raw transfer]
-
NACID_F_2(1OH5)
MUTS_ECOLI
[Raw transfer]
-
NACID_F_2(1OH8)
MUTS_ECOLI
[Raw transfer]
-
NACID_F_2(1OH6)
MUTS_ECOLI
[Raw transfer]
-
34 HHSearch 97.5439% -91 - C6 -1WB9 8.0 MUTS_ECOLI
8 PsiBlast_PDB 97.4837% -92 - C6 -3K0S 7.3 MUTS_ECOLI
10 PsiBlast_PDB 97.0437% -90 - C6 -1WB9 7.5 MUTS_ECOLI
5 PsiBlast_PDB 96.8537% -92 - C6 -2WTU 6.7 MUTS_ECOLI
2 PsiBlast_PDB 96.8537% -90 - C6 -1OH6 6.9 MUTS_ECOLI
9 PsiBlast_PDB 96.7237% -91 - C6 -1WBB 7.2 MUTS_ECOLI
28 PsiBlast_CBE 96.6837% -91 - C6 -1WBD 3.7 MUTS_ECOLI
30 PsiBlast_CBE 96.5937% -90 - C6 -1WBB 3.7 MUTS_ECOLI
25 PsiBlast_CBE 96.5937% -93 - C6 -1OH7 - MUTS_ECOLI -
31 PsiBlast_CBE 96.4637% -89 - C6 -1WB9 3.5 MUTS_ECOLI
7 PsiBlast_PDB 96.4637% -91 - C6 -1WBD 5.8 MUTS_ECOLI
24 PsiBlast_CBE 96.2837% -93 - C6 -1OH8 3.5 MUTS_ECOLI
6 PsiBlast_PDB 96.1437% -91 - C6 -3ZLJ 6.2 MUTS_ECOLI
3 PsiBlast_PDB 96.0737% -91 - C6 -1OH7 6.6 MUTS_ECOLI
27 PsiBlast_CBE 96.0537% -92 - C6 -1OH5 3.3 MUTS_ECOLI
29 PsiBlast_CBE 96.0037% -90 - C6 -3K0S - MUTS_ECOLI -
23 PsiBlast_CBE 95.9937% -88 - C6 -1W7A - MUTS_ECOLI -
4 PsiBlast_PDB 95.9437% -88 - C6 -1OH8 7.6 MUTS_ECOLI
11 PsiBlast_PDB 95.8436% -87 - C6 -1E3M 6.8 MUTS_ECOLI
1 PsiBlast_PDB 95.7337% -90 - C6 -1OH5 5.0 MUTS_ECOLI
21 PsiBlast_CBE 94.3737% -90 - C6 -3ZLJ 3.2 MUTS_ECOLI