Study : Wbm0266 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C2_S1
Best Complexes choosen after comparative docking [pKd > 3] : 2 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C2_S1
Complex: ADP_A_3(3JUX) / Model_17(3JUX/A) = [5.5] Download1391.4414.62MSFFFKRTFGSINKKIIKSFRKIVEQINALETKMQSLSDEELADKTEEFKRELKNGKTLNDLLVPAFAVVREASRRFLNMRHFDVQLIGGMVLHNGMVSEMKTGEGKTLVATLAAYLNSLEGKGVHVVTVNDYLAKRDTEWMSKLYNSLGVSVAFITNDLTDEERKEAYSADIVYSTNNELAFDYLRDNMKFSREDMVQRGFNYAIVDEVDSILIDEARTPLIISGPVEENNQIYKHIDKIVTKLVDSDYEVDEKGRAVFLTEDGISQVEELLRSYNLISEKSSLYDAGNMIMTHYIDQALRAHKLFTADKDYIVKDGKVVIIDEFTGRMMEGRRYSDGLHQALEAKENLEIQYENQTLASVTFQNYFRMYNKLSGMTGTAATEAEELRDIYRLNVVKIPTNVTVKRIDVDDEIYGTEKEKFNAVLKFIKECHKRLQPVLVGTVSIENSEKLSALLRNHFLRHSVLNARYHEQEAYIIAQAGVPGNITIATNMAGRGTDIQLGGNAEMIAKVELKKIKNADEREKKYQEIIERVKRDKEIAMKAGGLCVIGTERHESRRIDDQLRGRSGRQGDPGLSKFFLSLEDDLMRIFGSDRMRSFLKRVGLKNNEAIHHPWINKALEKAQKKVEARNYDVRKSLLKFDDVINNQRKVIFEQRNHILGNEINDLFEVYSEVNKSVMESIVQGGYYEDYVEDIAKEFHIRYGITLDKKDLAKFLNKQEALDYINGKVKEFFTEKEKYFNGQQTTDLWNTIVKQVMIMTLDHLWREHLSILESLRQSIGLRAMGQKDPLNEFKREAFLIFECMLERGKELTIHRLAHFKLVDNQEVGGRLHPTRKDNLPKVSRNDKCPCNSGKKYKHCHGAVTVMN
Complex: ADP_A_2(4YS0) / Model_15(4YS0/A) = [7.1] Download997.4817.17MSFFFKRTFGSINKKIIKSFRKIVEQINALETKMQSLSDEELADKTEEFKRELKNGKTLNDLLVPAFAVVREASRRFLNMRHFDVQLIGGMVLHNGMVSEMKTGEGKTLVATLAAYLNSLEGKGVHVVTVNDYLAKRDTEWMSKLYNSLGVSVAFITNDLTDEERKEAYSADIVYSTNNELAFDYLRDNMKFSREDMVQRGFNYAIVDEVDSILIDEARTPLIISGPVEENNQIYKHIDKIVTKLVDSDYEVDEKGRAVFLTEDGISQVEELLRSYNLISEKSSLYDAGNMIMTHYIDQALRAHKLFTADKDYIVKDGKVVIIDEFTGRMMEGRRYSDGLHQALEAKENLEIQYENQTLASVTFQNYFRMYNKLSGMTGTAATEAEELRDIYRLNVVKIPTNVTVKRIDVDDEIYGTEKEKFNAVLKFIKECHKRLQPVLVGTVSIENSEKLSALLRNHFLRHSVLNARYHEQEAYIIAQAGVPGNITIATNMAGRGTDIQLGGNAEMIAKVELKKIKNADEREKKYQEIIERVKRDKEIAMKAGGLCVIGTERHESRRIDDQLRGRSGRQGDPGLSKFFLSLEDDLMRIFGSDRMRSFLKRVGLKNNEAIHHPWINKALEKAQKKVEARNYDVRKSLLKFDDVINNQRKVIFEQRNHILGNEINDLFEVYSEVNKSVMESIVQGGYYEDYVEDIAKEFHIRYGITLDKKDLAKFLNKQEALDYINGKVKEFFTEKEKYFNGQQTTDLWNTIVKQVMIMTLDHLWREHLSILESLRQSIGLRAMGQKDPLNEFKREAFLIFECMLERGKELTIHRLAHFKLVDNQEVGGRLHPTRKDNLPKVSRNDKCPCNSGKKYKHCHGAVTVMN
Consensus
[pKd Mean = 6.30]
-1194
(s=196)
15
(s=1)
MSFFFKRTFGSINKKIIKSFRKIVEQINALETKMQSLSDEELADKTEEFKRELKNGKTLNDLLVPAFAVVREASRRFLNMRHFDVQLIGGMVLHNGMVSEMKTGEGKTLVATLAAYLNSLEGKGVHVVTVNDYLAKRDTEWMSKLYNSLGVSVAFITNDLTDEERKEAYSADIVYSTNNELAFDYLRDNMKFSREDMVQRGFNYAIVDEVDSILIDEARTPLIISGPVEENNQIYKHIDKIVTKLVDSDYEVDEKGRAVFLTEDGISQVEELLRSYNLISEKSSLYDAGNMIMTHYIDQALRAHKLFTADKDYIVKDGKVVIIDEFTGRMMEGRRYSDGLHQALEAKENLEIQYENQTLASVTFQNYFRMYNKLSGMTGTAATEAEELRDIYRLNVVKIPTNVTVKRIDVDDEIYGTEKEKFNAVLKFIKECHKRLQPVLVGTVSIENSEKLSALLRNHFLRHSVLNARYHEQEAYIIAQAGVPGNITIATNMAGRGTDIQLGGNAEMIAKVELKKIKNADEREKKYQEIIERVKRDKEIAMKAGGLCVIGTERHESRRIDDQLRGRSGRQGDPGLSKFFLSLEDDLMRIFGSDRMRSFLKRVGLKNNEAIHHPWINKALEKAQKKVEARNYDVRKSLLKFDDVINNQRKVIFEQRNHILGNEINDLFEVYSEVNKSVMESIVQGGYYEDYVEDIAKEFHIRYGITLDKKDLAKFLNKQEALDYINGKVKEFFTEKEKYFNGQQTTDLWNTIVKQVMIMTLDHLWREHLSILESLRQSIGLRAMGQKDPLNEFKREAFLIFECMLERGKELTIHRLAHFKLVDNQEVGGRLHPTRKDNLPKVSRNDKCPCNSGKKYKHCHGAVTVMN