Study : Wbm0298 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

Download fasta file
Download text file


Binding Site Number :C3_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C3_S1
Complex: NDP_A_13(1RM4) / Model_75(1RM4/A) = [6.6] Download1849.920.62MKIRVGINGLGRIGRSVLRAIHEVGKYNEQIEVVAVNGSLSTEQHAHLIRYDSVHGKFNGDIGFNESENWISTNGKKFSLYRERNPENIPWDVDVVLECTGAFNKRAEAAKHNTGKVIVSAPVSDADITIVYGVNNDMLKKEHKVISAGSCTTNCLAPVVKVLHFNLDMKSGFMTTVHAYTNDQNVLDGNHRDLRRARACGLSIVPTTTGAAKTIGSVIPELKGKLDGTAIRVPVANVSMVDLKFTTDKKVTAKEINEIFKNSVNDVLSICKEPLVSIDFVHNPYSAIVDLAGTYVTGDICRVAAWYDNEWAFSLRMLDIALLCYNRI
Complex: NDP_B_17(1RM3) / Model_91(1RM3/B) = [7.5] Download1746.102.29MKIRVGINGLGRIGRSVLRAIHEVGKYNEQIEVVAVNGSLSTEQHAHLIRYDSVHGKFNGDIGFNESENWISTNGKKFSLYRERNPENIPWDVDVVLECTGAFNKRAEAAKHNTGKVIVSAPVSDADITIVYGVNNDMLKKEHKVISAGSCTTNCLAPVVKVLHFNLDMKSGFMTTVHAYTNDQNVLDGNHRDLRRARACGLSIVPTTTGAAKTIGSVIPELKGKLDGTAIRVPVANVSMVDLKFTTDKKVTAKEINEIFKNSVNDVLSICKEPLVSIDFVHNPYSAIVDLAGTYVTGDICRVAAWYDNEWAFSLRMLDIALLCYNRI
Complex: NDP_B_16(1RM5) / Model_94(1RM5/B) = [7.7] Download2146.291.36MKIRVGINGLGRIGRSVLRAIHEVGKYNEQIEVVAVNGSLSTEQHAHLIRYDSVHGKFNGDIGFNESENWISTNGKKFSLYRERNPENIPWDVDVVLECTGAFNKRAEAAKHNTGKVIVSAPVSDADITIVYGVNNDMLKKEHKVISAGSCTTNCLAPVVKVLHFNLDMKSGFMTTVHAYTNDQNVLDGNHRDLRRARACGLSIVPTTTGAAKTIGSVIPELKGKLDGTAIRVPVANVSMVDLKFTTDKKVTAKEINEIFKNSVNDVLSICKEPLVSIDFVHNPYSAIVDLAGTYVTGDICRVAAWYDNEWAFSLRMLDIALLCYNRI
Complex: NDP_A_15(1RM5) / Model_95(1RM5/A) = [7.8] Download1970.221.36MKIRVGINGLGRIGRSVLRAIHEVGKYNEQIEVVAVNGSLSTEQHAHLIRYDSVHGKFNGDIGFNESENWISTNGKKFSLYRERNPENIPWDVDVVLECTGAFNKRAEAAKHNTGKVIVSAPVSDADITIVYGVNNDMLKKEHKVISAGSCTTNCLAPVVKVLHFNLDMKSGFMTTVHAYTNDQNVLDGNHRDLRRARACGLSIVPTTTGAAKTIGSVIPELKGKLDGTAIRVPVANVSMVDLKFTTDKKVTAKEINEIFKNSVNDVLSICKEPLVSIDFVHNPYSAIVDLAGTYVTGDICRVAAWYDNEWAFSLRMLDIALLCYNRI
Complex: NDP_O_12(1RM4) / Model_117(1RM4/O) = [7.9] Download1559.491.33MKIRVGINGLGRIGRSVLRAIHEVGKYNEQIEVVAVNGSLSTEQHAHLIRYDSVHGKFNGDIGFNESENWISTNGKKFSLYRERNPENIPWDVDVVLECTGAFNKRAEAAKHNTGKVIVSAPVSDADITIVYGVNNDMLKKEHKVISAGSCTTNCLAPVVKVLHFNLDMKSGFMTTVHAYTNDQNVLDGNHRDLRRARACGLSIVPTTTGAAKTIGSVIPELKGKLDGTAIRVPVANVSMVDLKFTTDKKVTAKEINEIFKNSVNDVLSICKEPLVSIDFVHNPYSAIVDLAGTYVTGDICRVAAWYDNEWAFSLRMLDIALLCYNRI
Consensus
[pKd Mean = 7.50]
-1854
(s=198)
1
(s=0)
MKIRVGINGLGRIGRSVLRAIHEVGKYNEQIEVVAVNGSLSTEQHAHLIRYDSVHGKFNGDIGFNESENWISTNGKKFSLYRERNPENIPWDVDVVLECTGAFNKRAEAAKHNTGKVIVSAPVSDADITIVYGVNNDMLKKEHKVISAGSCTTNCLAPVVKVLHFNLDMKSGFMTTVHAYTNDQNVLDGNHRDLRRARACGLSIVPTTTGAAKTIGSVIPELKGKLDGTAIRVPVANVSMVDLKFTTDKKVTAKEINEIFKNSVNDVLSICKEPLVSIDFVHNPYSAIVDLAGTYVTGDICRVAAWYDNEWAFSLRMLDIALLCYNRI