@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0310: (2015-11-30 )
MFRLEGRKFLVTGASGGIGQAIVKTMHKAGAILCVSGTKKETLEGVAKLYEKNIYILPCNLLNTEEVNQLINRASKLMGGLDGLVCNAGVTQDSLLLRMTDEAWQKVVDINLSSTFKLNREAYKKLTKNNWGRIINISSIIGLTGNAGQANYAASKAGIIAMSKSIAKEVASRNITVNCIAPGFMDTKMTKILTEEQKKKILDNIPMKRMGTGEEIAAGVLFLASDEAKYITGHVLNINGGLFM

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_B_16(4I08)
FABG_VIBCH
[Raw transfer]




NAP_A_3(3OP4)
?
[Raw transfer]




NAP_A_13(1Q7B)
FABG_ECOLI
[Raw transfer]




EDO_B_22(3RRO)
FABG_VIBCH
[Raw transfer]




EDO_A_10(3RRO)
FABG_VIBCH
[Raw transfer]




1PE_B_5(2PNF)
FABG_AQUAE
[Raw transfer]




EDO_A_11(3RRO)
FABG_VIBCH
[Raw transfer]




EDO_A_7(4I08)
FABG_VIBCH
[Raw transfer]




PGE_B_24(3RRO)
FABG_VIBCH
[Raw transfer]




1 PsiBlast_PDB 90.5954%-105 - C1 -3ENN - ? -
2 PsiBlast_PDB 87.2850%-118 - C1 -3F9I - FABG_RICPR -
74 PsiBlast_CBE 85.4944%-104 - C1 -4BO0 - FABG_PSEAE -
56 PsiBlast_CBE 84.6944%-107 - C1 -4BO6 - FABG_PSEAE -
84 PsiBlast_CBE 84.2544%-102 - C1 -4BNY - FABG_PSEAE -
68 PsiBlast_CBE 84.0144%-108 - C1 -4BO2 - FABG_PSEAE -
92 PsiBlast_CBE 83.7144%-101 - C1 -4BNW - FABG_PSEAE -
82 PsiBlast_CBE 83.7144%-105 - C1 -4BNY - FABG_PSEAE -
65 PsiBlast_CBE 83.6244%-106 - C1 -4BO3 - FABG_PSEAE -
80 PsiBlast_CBE 83.5344%-105 - C1 -4BNZ - FABG_PSEAE -
91 PsiBlast_CBE 83.2744%-105 - C1 -4BNW - FABG_PSEAE -
85 PsiBlast_CBE 82.5044%-105 - C1 -4BNX - FABG_PSEAE -
55 PsiBlast_CBE 82.1544% -97 - C1 -4BO6 - FABG_PSEAE -
73 PsiBlast_CBE 81.4344%-104 - C1 -4BO1 - FABG_PSEAE -
76 PsiBlast_CBE 81.4044%-105 - C1 -4BO0 - FABG_PSEAE -
21 PsiBlast_CBE 81.3844% -96 - C1 -2PNF 1.6 FABG_AQUAE
78 PsiBlast_CBE 81.3344%-102 - C1 -4BNZ - FABG_PSEAE -
89 PsiBlast_CBE 81.3044%-102 - C1 -4BNW - FABG_PSEAE -
70 PsiBlast_CBE 81.2144%-106 - C1 -4BO2 - FABG_PSEAE -
81 PsiBlast_CBE 80.9444%-103 - C1 -4BNZ - FABG_PSEAE -
11 PsiBlast_PDB 76.5445% -99 - C1 -1Q7B 8.7 FABG_ECOLI
20 PsiBlast_PDB 76.2844% -94 * C1 *3OP4 12.0 ?
29 PsiBlast_CBE 76.2245% -98 - C1 -3RRO 2.6 FABG_VIBCH
8 PsiBlast_PDB 75.4945% -98 - C1 -3RRO 2.9 FABG_VIBCH
27 PsiBlast_CBE 75.4545% -99 - C1 -4I08 9.5 FABG_VIBCH
9 PsiBlast_PDB 74.7145%-100 - C1 -4I08 3.1 FABG_VIBCH