@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0321: (2015-11-30 )
MIITIFGPPGSGKGTQSSLLIERYNLKLISVGDLLRNIISSGSELGKKIKDTVESGNLIQDGVICELLYDQLALMDDNFLFDGFPRNLNQAHFLTQILRERYNRDVDIVIELQLNDKVAIDRLKNRLVCLDCKSVYSTSSFKDDNNLVCTRCKSARLEKRIDDSDLSAIDRRIGEYHVQVKSLREYYRDKLLMIDANLNVDQVKQEIESKISCSLV

Atome Classification :

(42 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_6(4CF7)
KAD_AQUAE
[Raw transfer]




ADP_B_7(4JKY)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4CF7)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JL8)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JLA)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4JLA)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4JL8)
KAD_AQUAE
[Raw transfer]




ADP_B_5(4JLB)
KAD_AQUAE
[Raw transfer]




ADP_B_5(4JL5)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JLP)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JLO)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JLB)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JL6)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JKY)
KAD_AQUAE
[Raw transfer]




ADP_B_9(3TLX)
?
[Raw transfer]




ADP_B_6(4JL6)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JLD)
KAD_AQUAE
[Raw transfer]




ADP_B_5(4JLP)
KAD_AQUAE
[Raw transfer]




AMP_B_8(3SR0)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4JLO)
KAD_AQUAE
[Raw transfer]




AMP_A_3(4IKE)
KAD_AQUAE
[Raw transfer]




AMP_B_6(4JZK)
?
[Raw transfer]




AMP_A_3(4K46)
KAD_PHOPR
[Raw transfer]




AMP_A_4(4JZK)
?
[Raw transfer]




AMP_A_10(3TLX)
?
[Raw transfer]




AMP_B_5(2ECK)
KAD_ECOLI
[Raw transfer]




AMP_B_5(1ANK)
KAD_ECOLI
[Raw transfer]




GOL_A_3(3L0P)
?
[Raw transfer]




ADP_A_4(1QF9)
KCY_DICDI
[Raw transfer]




ADP_A_4(2CDN)
KAD_MYCTU
[Raw transfer]




ADP_B_6(4IKE)
KAD_AQUAE
[Raw transfer]




TAR_C_6(3L0S)
?
[Raw transfer]




TAR_A_4(3L0S)
?
[Raw transfer]




SRT_A_3(2XB4)
?
[Raw transfer]




SRT_A_3(2XB4)
?
[Raw transfer]




104 HHSearch 90.2333%-111 - C2 -1AK2 - KAD2_BOVIN -
44 PsiBlast_CBE 84.0133% -96 - C2 -2XB4 2.4 ?
28 PsiBlast_CBE 82.6833% -98 - C2 -4IKE 6.8 KAD_AQUAE
15 PsiBlast_PDB 82.2933% -96 - C2 -4JLP 6.7 KAD_AQUAE
10 PsiBlast_PDB 82.2733% -94 - C2 -2RGX - KAD_AQUAE -
14 PsiBlast_PDB 82.2633% -98 - C2 -4JLO 7.1 KAD_AQUAE
11 PsiBlast_PDB 82.1233%-102 - C2 -2RH5 - KAD_AQUAE -
50 PsiBlast_CBE 81.9832% -95 - C2 -3L0S 2.8 ?
8 PsiBlast_PDB 81.8633% -94 - C2 -4JLB 7.4 KAD_AQUAE
7 PsiBlast_PDB 81.8533% -90 - C2 -4JLA 7.1 KAD_AQUAE
13 PsiBlast_PDB 81.8033% -92 - C2 -4CF7 6.7 KAD_AQUAE
1 PsiBlast_PDB 81.7935% -93 - C2 -2C9Y - KAD2_HUMAN -
30 PsiBlast_CBE 81.4233% -91 - C2 -3SR0 6.9 KAD_AQUAE
26 PsiBlast_CBE 81.3033% -92 - C2 -4JL5 7.8 KAD_AQUAE
2 PsiBlast_PDB 81.2233% -87 - C2 -1AK2 - KAD2_BOVIN -
116 HHSearch 80.7934%-105 - C2 -2CDN 8.1 KAD_MYCTU
9 PsiBlast_PDB 80.6833% -89 - C2 -4JLD 8.0 KAD_AQUAE
5 PsiBlast_PDB 80.6133% -90 - C2 -4JL6 7.0 KAD_AQUAE
3 PsiBlast_PDB 80.4933% -86 - C2 -2AK2 - KAD2_BOVIN -
107 HHSearch 80.4830%-106 - C2 -1ZD8 - KAD3_HUMAN -
12 PsiBlast_PDB 80.4333% -89 - C2 -4IKE 6.7 KAD_AQUAE
32 PsiBlast_CBE 80.3233% -99 - C2 -4JLO 7.0 KAD_AQUAE
25 PsiBlast_CBE 80.1533% -92 - C2 -4JL6 6.8 KAD_AQUAE
6 PsiBlast_PDB 80.1233% -89 - C2 -4JL8 7.7 KAD_AQUAE
49 PsiBlast_CBE 80.1032% -88 - C2 -3L0S 2.8 ?
4 PsiBlast_PDB 80.0833% -94 - C2 -4JKY 6.8 KAD_AQUAE
103 HHSearch 79.8633% -96 - C2 -2XB4 2.4 ?
24 PsiBlast_CBE 79.6833% -89 - C2 -4JL8 8.7 KAD_AQUAE
29 PsiBlast_CBE 78.9033% -85 - C2 -4CF7 9.1 KAD_AQUAE
31 PsiBlast_CBE 78.7433% -96 - C2 -4JLP 7.7 KAD_AQUAE
27 PsiBlast_CBE 78.2533% -92 - C2 -4JKY 6.8 KAD_AQUAE
51 PsiBlast_CBE 78.1432% -89 - C2 -3L0P 1.9 ?
22 PsiBlast_CBE 77.2133% -90 - C2 -4JLB 7.6 KAD_AQUAE
20 PsiBlast_PDB 77.0232% -75 - C2 -4JZK 6.7 ?
23 PsiBlast_CBE 76.8733% -87 - C2 -4JLA 7.6 KAD_AQUAE
35 PsiBlast_CBE 75.9232% -75 - C2 -4JZK 6.5 ?
38 PsiBlast_CBE 74.4932% -75 - C2 -1ANK 6.4 KAD_ECOLI
37 PsiBlast_CBE 73.9332% -75 - C2 -2ECK 7.3 KAD_ECOLI
52 PsiBlast_CBE 73.4131% -75 * C2 *4K46 6.9 KAD_PHOPR
60 PsiBlast_CBE 70.9531% -73 - C2 -3TLX 6.6 ?
113 HHSearch 69.6730% -88 - C2 -1QF9 7.4 KCY_DICDI
61 PsiBlast_CBE 69.6431% -68 - C2 -3TLX 5.5 ?